Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav8-1A0A075B641 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav8-1A0A075B641 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav8-1A0A075B641 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
Trav8-1A0A075B641 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
Trav8-1A0A075B641 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC16.24■□□□□ 0.19
Trav8-1A0A075B641 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC16.24■□□□□ 0.19
Trav8-1A0A075B641 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav8-1A0A075B641 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav8-1A0A075B641 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav8-1A0A075B641 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC16.23■□□□□ 0.19
Trav8-1A0A075B641 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Trav8-1A0A075B641 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Trav8-1A0A075B641 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav8-1A0A075B641 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC16.23■□□□□ 0.19
Trav8-1A0A075B641 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Trav8-1A0A075B641 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC16.22■□□□□ 0.19
Trav8-1A0A075B641 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Trav8-1A0A075B641 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav8-1A0A075B641 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav8-1A0A075B641 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC16.21■□□□□ 0.19
Trav8-1A0A075B641 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Trav8-1A0A075B641 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav8-1A0A075B641 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Trav8-1A0A075B641 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav8-1A0A075B641 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav8-1A0A075B641 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav8-1A0A075B641 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trav8-1A0A075B641 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Trav8-1A0A075B641 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Trav8-1A0A075B641 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trav8-1A0A075B641 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC16.19■□□□□ 0.18
Trav8-1A0A075B641 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav8-1A0A075B641 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav8-1A0A075B641 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Trav8-1A0A075B641 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav8-1A0A075B641 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav8-1A0A075B641 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav8-1A0A075B641 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav8-1A0A075B641 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav8-1A0A075B641 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav8-1A0A075B641 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav8-1A0A075B641 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trav8-1A0A075B641 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav8-1A0A075B641 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Trav8-1A0A075B641 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trav8-1A0A075B641 Gm38160-201ENSMUST00000193090 2499 ntBASIC16.17■□□□□ 0.18
Trav8-1A0A075B641 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav8-1A0A075B641 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Trav8-1A0A075B641 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Trav8-1A0A075B641 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC16.16■□□□□ 0.18
Trav8-1A0A075B641 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Trav8-1A0A075B641 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Trav8-1A0A075B641 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav8-1A0A075B641 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Trav8-1A0A075B641 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Trav8-1A0A075B641 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav8-1A0A075B641 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav8-1A0A075B641 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
Trav8-1A0A075B641 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav8-1A0A075B641 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav8-1A0A075B641 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Trav8-1A0A075B641 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trav8-1A0A075B641 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav8-1A0A075B641 Notumos-201ENSMUST00000151998 2659 ntBASIC16.13■□□□□ 0.17
Trav8-1A0A075B641 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav8-1A0A075B641 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav8-1A0A075B641 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Trav8-1A0A075B641 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav8-1A0A075B641 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav8-1A0A075B641 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Trav8-1A0A075B641 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Trav8-1A0A075B641 Gm26115-201ENSMUST00000175605 87 ntBASIC16.12■□□□□ 0.17
Trav8-1A0A075B641 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav8-1A0A075B641 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav8-1A0A075B641 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav8-1A0A075B641 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav8-1A0A075B641 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav8-1A0A075B641 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav8-1A0A075B641 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav8-1A0A075B641 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Trav8-1A0A075B641 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav8-1A0A075B641 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Trav8-1A0A075B641 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav8-1A0A075B641 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Trav8-1A0A075B641 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Trav8-1A0A075B641 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
Trav8-1A0A075B641 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav8-1A0A075B641 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav8-1A0A075B641 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav8-1A0A075B641 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Trav8-1A0A075B641 Gm8109-201ENSMUST00000194076 746 ntBASIC16.1■□□□□ 0.17
Trav8-1A0A075B641 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Trav8-1A0A075B641 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav8-1A0A075B641 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav8-1A0A075B641 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Trav8-1A0A075B641 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav8-1A0A075B641 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav8-1A0A075B641 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav8-1A0A075B641 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC16.08■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 152.1 ms