Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
H2afb3S4R1G7 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
H2afb3S4R1G7 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
H2afb3S4R1G7 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
H2afb3S4R1G7 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
H2afb3S4R1G7 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
H2afb3S4R1G7 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
H2afb3S4R1G7 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
H2afb3S4R1G7 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
H2afb3S4R1G7 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
H2afb3S4R1G7 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
H2afb3S4R1G7 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
H2afb3S4R1G7 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
H2afb3S4R1G7 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
H2afb3S4R1G7 Gm11950-201ENSMUST00000121615 838 ntBASIC14.02□□□□□ -0.17
H2afb3S4R1G7 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
H2afb3S4R1G7 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
H2afb3S4R1G7 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
H2afb3S4R1G7 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
H2afb3S4R1G7 Gm10231-201ENSMUST00000181584 441 ntBASIC14.02□□□□□ -0.17
H2afb3S4R1G7 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
H2afb3S4R1G7 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC14.02□□□□□ -0.17
H2afb3S4R1G7 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
H2afb3S4R1G7 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
H2afb3S4R1G7 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
H2afb3S4R1G7 Gm10175-202ENSMUST00000208752 441 ntBASIC14.02□□□□□ -0.17
H2afb3S4R1G7 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC14.02□□□□□ -0.17
H2afb3S4R1G7 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
H2afb3S4R1G7 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
H2afb3S4R1G7 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
H2afb3S4R1G7 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC14.02□□□□□ -0.17
H2afb3S4R1G7 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
H2afb3S4R1G7 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
H2afb3S4R1G7 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
H2afb3S4R1G7 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
H2afb3S4R1G7 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
H2afb3S4R1G7 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
H2afb3S4R1G7 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
H2afb3S4R1G7 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
H2afb3S4R1G7 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
H2afb3S4R1G7 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
H2afb3S4R1G7 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
H2afb3S4R1G7 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
H2afb3S4R1G7 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
H2afb3S4R1G7 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
H2afb3S4R1G7 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
H2afb3S4R1G7 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC14.01□□□□□ -0.17
H2afb3S4R1G7 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
H2afb3S4R1G7 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
H2afb3S4R1G7 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
H2afb3S4R1G7 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC14.01□□□□□ -0.17
H2afb3S4R1G7 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
H2afb3S4R1G7 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC14.01□□□□□ -0.17
H2afb3S4R1G7 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
H2afb3S4R1G7 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
H2afb3S4R1G7 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
H2afb3S4R1G7 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
H2afb3S4R1G7 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
H2afb3S4R1G7 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
H2afb3S4R1G7 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
H2afb3S4R1G7 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC14.01□□□□□ -0.17
H2afb3S4R1G7 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
H2afb3S4R1G7 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
H2afb3S4R1G7 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
H2afb3S4R1G7 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
H2afb3S4R1G7 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
H2afb3S4R1G7 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
H2afb3S4R1G7 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
H2afb3S4R1G7 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC14□□□□□ -0.17
H2afb3S4R1G7 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC14□□□□□ -0.17
H2afb3S4R1G7 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
H2afb3S4R1G7 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC14□□□□□ -0.17
H2afb3S4R1G7 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
H2afb3S4R1G7 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC14□□□□□ -0.17
H2afb3S4R1G7 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
H2afb3S4R1G7 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC14□□□□□ -0.17
H2afb3S4R1G7 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
H2afb3S4R1G7 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC14□□□□□ -0.17
H2afb3S4R1G7 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
H2afb3S4R1G7 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
H2afb3S4R1G7 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC14□□□□□ -0.17
H2afb3S4R1G7 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC14□□□□□ -0.17
H2afb3S4R1G7 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
H2afb3S4R1G7 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC14□□□□□ -0.17
H2afb3S4R1G7 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
H2afb3S4R1G7 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
H2afb3S4R1G7 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
H2afb3S4R1G7 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
H2afb3S4R1G7 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
H2afb3S4R1G7 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
H2afb3S4R1G7 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
H2afb3S4R1G7 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
H2afb3S4R1G7 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
H2afb3S4R1G7 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
H2afb3S4R1G7 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
H2afb3S4R1G7 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
H2afb3S4R1G7 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
H2afb3S4R1G7 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC13.99□□□□□ -0.17
H2afb3S4R1G7 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
H2afb3S4R1G7 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms