Protein–RNA interactions for Protein: Q9Z0D9

Cx3cr1, CX3C chemokine receptor 1, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cr1Q9Z0D9 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC13.2□□□□□ -0.3
Cx3cr1Q9Z0D9 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cx3cr1Q9Z0D9 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cx3cr1Q9Z0D9 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cx3cr1Q9Z0D9 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cx3cr1Q9Z0D9 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Cx3cr1Q9Z0D9 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Cx3cr1Q9Z0D9 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Cx3cr1Q9Z0D9 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cx3cr1Q9Z0D9 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Cx3cr1Q9Z0D9 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cx3cr1Q9Z0D9 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Cx3cr1Q9Z0D9 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cx3cr1Q9Z0D9 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cx3cr1Q9Z0D9 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cx3cr1Q9Z0D9 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cx3cr1Q9Z0D9 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Cx3cr1Q9Z0D9 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC13.19□□□□□ -0.3
Cx3cr1Q9Z0D9 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cx3cr1Q9Z0D9 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Cx3cr1Q9Z0D9 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Cx3cr1Q9Z0D9 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cx3cr1Q9Z0D9 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cx3cr1Q9Z0D9 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Cx3cr1Q9Z0D9 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Cx3cr1Q9Z0D9 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC13.19□□□□□ -0.3
Cx3cr1Q9Z0D9 Mir1668-201ENSMUST00000184114 107 ntBASIC13.19□□□□□ -0.3
Cx3cr1Q9Z0D9 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC13.19□□□□□ -0.3
Cx3cr1Q9Z0D9 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC13.19□□□□□ -0.3
Cx3cr1Q9Z0D9 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC13.19□□□□□ -0.3
Cx3cr1Q9Z0D9 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Cx3cr1Q9Z0D9 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cx3cr1Q9Z0D9 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC13.19□□□□□ -0.3
Cx3cr1Q9Z0D9 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Cx3cr1Q9Z0D9 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Cx3cr1Q9Z0D9 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Cx3cr1Q9Z0D9 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC13.19□□□□□ -0.3
Cx3cr1Q9Z0D9 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC13.19□□□□□ -0.3
Cx3cr1Q9Z0D9 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cx3cr1Q9Z0D9 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cx3cr1Q9Z0D9 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cx3cr1Q9Z0D9 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cx3cr1Q9Z0D9 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cx3cr1Q9Z0D9 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC13.19□□□□□ -0.3
Cx3cr1Q9Z0D9 Wnt10b-206ENSMUST00000228546 2709 ntBASIC13.19□□□□□ -0.3
Cx3cr1Q9Z0D9 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cx3cr1Q9Z0D9 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cx3cr1Q9Z0D9 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cx3cr1Q9Z0D9 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cx3cr1Q9Z0D9 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cx3cr1Q9Z0D9 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cx3cr1Q9Z0D9 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cx3cr1Q9Z0D9 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cx3cr1Q9Z0D9 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cx3cr1Q9Z0D9 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cx3cr1Q9Z0D9 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cx3cr1Q9Z0D9 Gm9768-201ENSMUST00000206007 2861 ntBASIC13.18□□□□□ -0.3
Cx3cr1Q9Z0D9 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cx3cr1Q9Z0D9 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cx3cr1Q9Z0D9 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Cx3cr1Q9Z0D9 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
Cx3cr1Q9Z0D9 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC13.18□□□□□ -0.3
Cx3cr1Q9Z0D9 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC13.18□□□□□ -0.3
Cx3cr1Q9Z0D9 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC13.18□□□□□ -0.3
Cx3cr1Q9Z0D9 Gm10052-201ENSMUST00000168019 960 ntBASIC13.18□□□□□ -0.3
Cx3cr1Q9Z0D9 Gm44430-201ENSMUST00000203376 995 ntBASIC13.18□□□□□ -0.3
Cx3cr1Q9Z0D9 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC13.18□□□□□ -0.3
Cx3cr1Q9Z0D9 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cx3cr1Q9Z0D9 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cx3cr1Q9Z0D9 Gm7729-201ENSMUST00000050143 801 ntBASIC13.18□□□□□ -0.3
Cx3cr1Q9Z0D9 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cx3cr1Q9Z0D9 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cx3cr1Q9Z0D9 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Cx3cr1Q9Z0D9 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cx3cr1Q9Z0D9 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cx3cr1Q9Z0D9 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC13.18□□□□□ -0.3
Cx3cr1Q9Z0D9 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cx3cr1Q9Z0D9 Gm37305-201ENSMUST00000195714 4279 ntBASIC13.18□□□□□ -0.3
Cx3cr1Q9Z0D9 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
Cx3cr1Q9Z0D9 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Cx3cr1Q9Z0D9 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC13.18□□□□□ -0.3
Cx3cr1Q9Z0D9 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cx3cr1Q9Z0D9 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cx3cr1Q9Z0D9 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cx3cr1Q9Z0D9 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Cx3cr1Q9Z0D9 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC13.17□□□□□ -0.3
Cx3cr1Q9Z0D9 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Cx3cr1Q9Z0D9 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cx3cr1Q9Z0D9 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Cx3cr1Q9Z0D9 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Cx3cr1Q9Z0D9 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Cx3cr1Q9Z0D9 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC13.17□□□□□ -0.3
Cx3cr1Q9Z0D9 Gm8784-201ENSMUST00000222096 1435 ntBASIC13.17□□□□□ -0.3
Cx3cr1Q9Z0D9 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
Cx3cr1Q9Z0D9 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Cx3cr1Q9Z0D9 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cx3cr1Q9Z0D9 Gm16425-201ENSMUST00000118143 3130 ntBASIC13.17□□□□□ -0.3
Cx3cr1Q9Z0D9 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cx3cr1Q9Z0D9 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cx3cr1Q9Z0D9 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 61.6 ms