Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
ClcnkaQ9WUB7 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ClcnkaQ9WUB7 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
ClcnkaQ9WUB7 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
ClcnkaQ9WUB7 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ClcnkaQ9WUB7 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ClcnkaQ9WUB7 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC14.34□□□□□ -0.11
ClcnkaQ9WUB7 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
ClcnkaQ9WUB7 Gm7935-201ENSMUST00000100555 1278 ntBASIC14.34□□□□□ -0.11
ClcnkaQ9WUB7 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC14.34□□□□□ -0.11
ClcnkaQ9WUB7 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
ClcnkaQ9WUB7 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC14.34□□□□□ -0.11
ClcnkaQ9WUB7 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC14.34□□□□□ -0.11
ClcnkaQ9WUB7 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC14.34□□□□□ -0.11
ClcnkaQ9WUB7 Gm25745-201ENSMUST00000174945 133 ntBASIC14.34□□□□□ -0.11
ClcnkaQ9WUB7 Gm28033-201ENSMUST00000184224 96 ntBASIC14.34□□□□□ -0.11
ClcnkaQ9WUB7 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC14.34□□□□□ -0.11
ClcnkaQ9WUB7 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
ClcnkaQ9WUB7 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ClcnkaQ9WUB7 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ClcnkaQ9WUB7 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC14.34□□□□□ -0.11
ClcnkaQ9WUB7 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ClcnkaQ9WUB7 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ClcnkaQ9WUB7 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
ClcnkaQ9WUB7 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ClcnkaQ9WUB7 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ClcnkaQ9WUB7 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
ClcnkaQ9WUB7 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ClcnkaQ9WUB7 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
ClcnkaQ9WUB7 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
ClcnkaQ9WUB7 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
ClcnkaQ9WUB7 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC14.33□□□□□ -0.11
ClcnkaQ9WUB7 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
ClcnkaQ9WUB7 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC14.33□□□□□ -0.11
ClcnkaQ9WUB7 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
ClcnkaQ9WUB7 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ClcnkaQ9WUB7 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ClcnkaQ9WUB7 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
ClcnkaQ9WUB7 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ClcnkaQ9WUB7 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC14.33□□□□□ -0.12
ClcnkaQ9WUB7 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
ClcnkaQ9WUB7 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC14.33□□□□□ -0.12
ClcnkaQ9WUB7 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
ClcnkaQ9WUB7 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC14.33□□□□□ -0.12
ClcnkaQ9WUB7 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ClcnkaQ9WUB7 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
ClcnkaQ9WUB7 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ClcnkaQ9WUB7 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
ClcnkaQ9WUB7 Gm10819-201ENSMUST00000099988 561 ntBASIC14.33□□□□□ -0.12
ClcnkaQ9WUB7 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC14.33□□□□□ -0.12
ClcnkaQ9WUB7 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC14.33□□□□□ -0.12
ClcnkaQ9WUB7 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ClcnkaQ9WUB7 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
ClcnkaQ9WUB7 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ClcnkaQ9WUB7 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ClcnkaQ9WUB7 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC14.33□□□□□ -0.12
ClcnkaQ9WUB7 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC14.33□□□□□ -0.12
ClcnkaQ9WUB7 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ClcnkaQ9WUB7 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
ClcnkaQ9WUB7 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
ClcnkaQ9WUB7 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ClcnkaQ9WUB7 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
ClcnkaQ9WUB7 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ClcnkaQ9WUB7 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
ClcnkaQ9WUB7 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
ClcnkaQ9WUB7 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ClcnkaQ9WUB7 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ClcnkaQ9WUB7 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ClcnkaQ9WUB7 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ClcnkaQ9WUB7 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
ClcnkaQ9WUB7 Gm9172-201ENSMUST00000212092 954 ntBASIC14.32□□□□□ -0.12
ClcnkaQ9WUB7 Vti1a-206ENSMUST00000225529 1244 ntBASIC14.32□□□□□ -0.12
ClcnkaQ9WUB7 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
ClcnkaQ9WUB7 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC14.32□□□□□ -0.12
ClcnkaQ9WUB7 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC14.32□□□□□ -0.12
ClcnkaQ9WUB7 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ClcnkaQ9WUB7 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ClcnkaQ9WUB7 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC14.32□□□□□ -0.12
ClcnkaQ9WUB7 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
ClcnkaQ9WUB7 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ClcnkaQ9WUB7 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ClcnkaQ9WUB7 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ClcnkaQ9WUB7 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ClcnkaQ9WUB7 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
ClcnkaQ9WUB7 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
ClcnkaQ9WUB7 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
ClcnkaQ9WUB7 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ClcnkaQ9WUB7 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
ClcnkaQ9WUB7 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ClcnkaQ9WUB7 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ClcnkaQ9WUB7 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
ClcnkaQ9WUB7 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
ClcnkaQ9WUB7 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
ClcnkaQ9WUB7 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
ClcnkaQ9WUB7 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ClcnkaQ9WUB7 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ClcnkaQ9WUB7 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
ClcnkaQ9WUB7 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
ClcnkaQ9WUB7 Gm12644-201ENSMUST00000119935 606 ntBASIC14.31□□□□□ -0.12
ClcnkaQ9WUB7 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms