Protein–RNA interactions for Protein: Q9QZS8

Sh2d3c, SH2 domain-containing protein 3C, mousemouse

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d3cQ9QZS8 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Sh2d3cQ9QZS8 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sh2d3cQ9QZS8 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC15.26■□□□□ 0.03
Sh2d3cQ9QZS8 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sh2d3cQ9QZS8 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sh2d3cQ9QZS8 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Sh2d3cQ9QZS8 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sh2d3cQ9QZS8 Gfra2-202ENSMUST00000227633 1480 ntBASIC15.26■□□□□ 0.03
Sh2d3cQ9QZS8 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sh2d3cQ9QZS8 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sh2d3cQ9QZS8 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC15.26■□□□□ 0.03
Sh2d3cQ9QZS8 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Sh2d3cQ9QZS8 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Sh2d3cQ9QZS8 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sh2d3cQ9QZS8 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sh2d3cQ9QZS8 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sh2d3cQ9QZS8 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sh2d3cQ9QZS8 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC15.25■□□□□ 0.03
Sh2d3cQ9QZS8 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sh2d3cQ9QZS8 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sh2d3cQ9QZS8 Rbfox2-206ENSMUST00000227314 1810 ntBASIC15.25■□□□□ 0.03
Sh2d3cQ9QZS8 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Sh2d3cQ9QZS8 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Sh2d3cQ9QZS8 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
Sh2d3cQ9QZS8 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
Sh2d3cQ9QZS8 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sh2d3cQ9QZS8 Gm8668-201ENSMUST00000120559 1447 ntBASIC15.25■□□□□ 0.03
Sh2d3cQ9QZS8 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Sh2d3cQ9QZS8 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Sh2d3cQ9QZS8 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sh2d3cQ9QZS8 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Sh2d3cQ9QZS8 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sh2d3cQ9QZS8 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sh2d3cQ9QZS8 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Sh2d3cQ9QZS8 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sh2d3cQ9QZS8 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sh2d3cQ9QZS8 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sh2d3cQ9QZS8 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sh2d3cQ9QZS8 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sh2d3cQ9QZS8 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sh2d3cQ9QZS8 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sh2d3cQ9QZS8 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sh2d3cQ9QZS8 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Sh2d3cQ9QZS8 Gm6433-201ENSMUST00000118634 875 ntBASIC15.24■□□□□ 0.03
Sh2d3cQ9QZS8 Gm14464-201ENSMUST00000119658 1254 ntBASIC15.24■□□□□ 0.03
Sh2d3cQ9QZS8 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sh2d3cQ9QZS8 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Sh2d3cQ9QZS8 Il3ra-202ENSMUST00000223589 738 ntBASIC15.24■□□□□ 0.03
Sh2d3cQ9QZS8 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sh2d3cQ9QZS8 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sh2d3cQ9QZS8 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC15.24■□□□□ 0.03
Sh2d3cQ9QZS8 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Sh2d3cQ9QZS8 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sh2d3cQ9QZS8 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC15.24■□□□□ 0.03
Sh2d3cQ9QZS8 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sh2d3cQ9QZS8 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Sh2d3cQ9QZS8 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sh2d3cQ9QZS8 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sh2d3cQ9QZS8 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sh2d3cQ9QZS8 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Sh2d3cQ9QZS8 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Sh2d3cQ9QZS8 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Sh2d3cQ9QZS8 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sh2d3cQ9QZS8 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
Sh2d3cQ9QZS8 Gm4217-201ENSMUST00000182243 1002 ntBASIC15.23■□□□□ 0.03
Sh2d3cQ9QZS8 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Sh2d3cQ9QZS8 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sh2d3cQ9QZS8 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sh2d3cQ9QZS8 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sh2d3cQ9QZS8 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sh2d3cQ9QZS8 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Sh2d3cQ9QZS8 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sh2d3cQ9QZS8 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sh2d3cQ9QZS8 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sh2d3cQ9QZS8 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sh2d3cQ9QZS8 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Sh2d3cQ9QZS8 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Sh2d3cQ9QZS8 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sh2d3cQ9QZS8 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC15.22■□□□□ 0.03
Sh2d3cQ9QZS8 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sh2d3cQ9QZS8 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Sh2d3cQ9QZS8 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sh2d3cQ9QZS8 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sh2d3cQ9QZS8 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Sh2d3cQ9QZS8 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC15.22■□□□□ 0.03
Sh2d3cQ9QZS8 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Sh2d3cQ9QZS8 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC15.22■□□□□ 0.03
Sh2d3cQ9QZS8 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Sh2d3cQ9QZS8 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Sh2d3cQ9QZS8 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Sh2d3cQ9QZS8 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Sh2d3cQ9QZS8 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Sh2d3cQ9QZS8 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Sh2d3cQ9QZS8 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Sh2d3cQ9QZS8 AC120002.2-201ENSMUST00000220205 773 ntBASIC15.22■□□□□ 0.03
Sh2d3cQ9QZS8 AC159205.6-201ENSMUST00000224935 887 ntBASIC15.22■□□□□ 0.03
Sh2d3cQ9QZS8 Gm9987-201ENSMUST00000069768 567 ntBASIC15.22■□□□□ 0.03
Sh2d3cQ9QZS8 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sh2d3cQ9QZS8 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Sh2d3cQ9QZS8 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms