Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trem1Q9JKE2 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trem1Q9JKE2 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Trem1Q9JKE2 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Trem1Q9JKE2 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC14□□□□□ -0.17
Trem1Q9JKE2 Mir5133-201ENSMUST00000174955 77 ntBASIC14□□□□□ -0.17
Trem1Q9JKE2 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trem1Q9JKE2 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC14□□□□□ -0.17
Trem1Q9JKE2 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trem1Q9JKE2 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trem1Q9JKE2 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trem1Q9JKE2 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trem1Q9JKE2 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC14□□□□□ -0.17
Trem1Q9JKE2 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
Trem1Q9JKE2 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trem1Q9JKE2 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trem1Q9JKE2 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trem1Q9JKE2 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trem1Q9JKE2 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trem1Q9JKE2 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trem1Q9JKE2 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC13.99□□□□□ -0.17
Trem1Q9JKE2 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trem1Q9JKE2 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
Trem1Q9JKE2 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trem1Q9JKE2 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trem1Q9JKE2 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC13.99□□□□□ -0.17
Trem1Q9JKE2 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trem1Q9JKE2 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Trem1Q9JKE2 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trem1Q9JKE2 Gm5408-201ENSMUST00000197998 747 ntBASIC13.99□□□□□ -0.17
Trem1Q9JKE2 Gm2559-201ENSMUST00000201323 363 ntBASIC13.99□□□□□ -0.17
Trem1Q9JKE2 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC13.99□□□□□ -0.17
Trem1Q9JKE2 AC166341.7-201ENSMUST00000221698 126 ntBASIC13.99□□□□□ -0.17
Trem1Q9JKE2 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
Trem1Q9JKE2 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trem1Q9JKE2 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC13.99□□□□□ -0.17
Trem1Q9JKE2 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trem1Q9JKE2 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trem1Q9JKE2 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
Trem1Q9JKE2 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trem1Q9JKE2 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trem1Q9JKE2 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Trem1Q9JKE2 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Trem1Q9JKE2 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trem1Q9JKE2 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trem1Q9JKE2 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trem1Q9JKE2 Ptprs-211ENSMUST00000223859 5588 ntBASIC13.99□□□□□ -0.17
Trem1Q9JKE2 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trem1Q9JKE2 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trem1Q9JKE2 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trem1Q9JKE2 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trem1Q9JKE2 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trem1Q9JKE2 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trem1Q9JKE2 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trem1Q9JKE2 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC13.98□□□□□ -0.17
Trem1Q9JKE2 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trem1Q9JKE2 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC13.98□□□□□ -0.17
Trem1Q9JKE2 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC13.98□□□□□ -0.17
Trem1Q9JKE2 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC13.98□□□□□ -0.17
Trem1Q9JKE2 AC122769.4-201ENSMUST00000228166 901 ntBASIC13.98□□□□□ -0.17
Trem1Q9JKE2 AC163280.1-201ENSMUST00000228194 1100 ntBASIC13.98□□□□□ -0.17
Trem1Q9JKE2 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trem1Q9JKE2 Gm38042-201ENSMUST00000191614 5208 ntBASIC13.98□□□□□ -0.17
Trem1Q9JKE2 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trem1Q9JKE2 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC13.98□□□□□ -0.17
Trem1Q9JKE2 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trem1Q9JKE2 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
Trem1Q9JKE2 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Trem1Q9JKE2 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trem1Q9JKE2 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trem1Q9JKE2 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC13.98□□□□□ -0.17
Trem1Q9JKE2 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trem1Q9JKE2 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
Trem1Q9JKE2 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC13.98□□□□□ -0.17
Trem1Q9JKE2 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trem1Q9JKE2 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trem1Q9JKE2 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trem1Q9JKE2 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trem1Q9JKE2 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC13.97□□□□□ -0.17
Trem1Q9JKE2 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trem1Q9JKE2 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trem1Q9JKE2 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Trem1Q9JKE2 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trem1Q9JKE2 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trem1Q9JKE2 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trem1Q9JKE2 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trem1Q9JKE2 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC13.97□□□□□ -0.17
Trem1Q9JKE2 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC13.97□□□□□ -0.17
Trem1Q9JKE2 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC13.97□□□□□ -0.17
Trem1Q9JKE2 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trem1Q9JKE2 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trem1Q9JKE2 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trem1Q9JKE2 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trem1Q9JKE2 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trem1Q9JKE2 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trem1Q9JKE2 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trem1Q9JKE2 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trem1Q9JKE2 Gm43859-201ENSMUST00000200075 1412 ntBASIC13.97□□□□□ -0.17
Trem1Q9JKE2 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC13.97□□□□□ -0.17
Trem1Q9JKE2 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms