Protein–RNA interactions for Protein: Q9CPV1

Ska1, Spindle and kinetochore-associated protein 1, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska1Q9CPV1 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ska1Q9CPV1 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ska1Q9CPV1 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ska1Q9CPV1 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC14.73□□□□□ -0.05
Ska1Q9CPV1 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Ska1Q9CPV1 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Ska1Q9CPV1 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ska1Q9CPV1 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ska1Q9CPV1 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ska1Q9CPV1 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ska1Q9CPV1 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ska1Q9CPV1 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ska1Q9CPV1 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ska1Q9CPV1 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ska1Q9CPV1 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ska1Q9CPV1 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC14.72□□□□□ -0.05
Ska1Q9CPV1 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ska1Q9CPV1 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Ska1Q9CPV1 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC14.72□□□□□ -0.05
Ska1Q9CPV1 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Ska1Q9CPV1 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Ska1Q9CPV1 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC14.72□□□□□ -0.05
Ska1Q9CPV1 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ska1Q9CPV1 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC14.72□□□□□ -0.05
Ska1Q9CPV1 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Ska1Q9CPV1 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Ska1Q9CPV1 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC14.72□□□□□ -0.05
Ska1Q9CPV1 Gm37736-201ENSMUST00000193564 2802 ntBASIC14.72□□□□□ -0.05
Ska1Q9CPV1 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ska1Q9CPV1 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ska1Q9CPV1 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Ska1Q9CPV1 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ska1Q9CPV1 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ska1Q9CPV1 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ska1Q9CPV1 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC14.72□□□□□ -0.05
Ska1Q9CPV1 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ska1Q9CPV1 AC132265.1-201ENSMUST00000219233 1665 ntBASIC14.71□□□□□ -0.05
Ska1Q9CPV1 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC14.71□□□□□ -0.05
Ska1Q9CPV1 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC14.71□□□□□ -0.05
Ska1Q9CPV1 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC14.71□□□□□ -0.05
Ska1Q9CPV1 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Ska1Q9CPV1 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC14.71□□□□□ -0.05
Ska1Q9CPV1 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ska1Q9CPV1 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Ska1Q9CPV1 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ska1Q9CPV1 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Ska1Q9CPV1 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Ska1Q9CPV1 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ska1Q9CPV1 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC14.71□□□□□ -0.05
Ska1Q9CPV1 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Ska1Q9CPV1 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ska1Q9CPV1 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Ska1Q9CPV1 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Ska1Q9CPV1 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Ska1Q9CPV1 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC14.71□□□□□ -0.06
Ska1Q9CPV1 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ska1Q9CPV1 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ska1Q9CPV1 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Ska1Q9CPV1 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Ska1Q9CPV1 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ska1Q9CPV1 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ska1Q9CPV1 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ska1Q9CPV1 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Ska1Q9CPV1 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ska1Q9CPV1 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Ska1Q9CPV1 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ska1Q9CPV1 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ska1Q9CPV1 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Ska1Q9CPV1 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Ska1Q9CPV1 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ska1Q9CPV1 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ska1Q9CPV1 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC14.7□□□□□ -0.06
Ska1Q9CPV1 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC14.7□□□□□ -0.06
Ska1Q9CPV1 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ska1Q9CPV1 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Ska1Q9CPV1 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Ska1Q9CPV1 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ska1Q9CPV1 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ska1Q9CPV1 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ska1Q9CPV1 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC14.7□□□□□ -0.06
Ska1Q9CPV1 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ska1Q9CPV1 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ska1Q9CPV1 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ska1Q9CPV1 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ska1Q9CPV1 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ska1Q9CPV1 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ska1Q9CPV1 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Ska1Q9CPV1 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ska1Q9CPV1 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Ska1Q9CPV1 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ska1Q9CPV1 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ska1Q9CPV1 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Ska1Q9CPV1 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Ska1Q9CPV1 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC14.69□□□□□ -0.06
Ska1Q9CPV1 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Ska1Q9CPV1 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Ska1Q9CPV1 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Ska1Q9CPV1 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC14.69□□□□□ -0.06
Ska1Q9CPV1 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC14.69□□□□□ -0.06
Ska1Q9CPV1 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms