Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 Gm18055-201ENSMUST00000208254 547 ntBASIC17.42■□□□□ 0.38
Pcdh15Q99PJ1 Gm9908-201ENSMUST00000211534 448 ntBASIC17.42■□□□□ 0.38
Pcdh15Q99PJ1 CT009510.1-201ENSMUST00000227972 270 ntBASIC17.42■□□□□ 0.38
Pcdh15Q99PJ1 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC17.42■□□□□ 0.38
Pcdh15Q99PJ1 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC17.42■□□□□ 0.38
Pcdh15Q99PJ1 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Pcdh15Q99PJ1 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdh15Q99PJ1 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdh15Q99PJ1 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdh15Q99PJ1 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdh15Q99PJ1 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC17.41■□□□□ 0.38
Pcdh15Q99PJ1 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdh15Q99PJ1 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdh15Q99PJ1 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdh15Q99PJ1 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdh15Q99PJ1 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdh15Q99PJ1 Gm11478-201ENSMUST00000117851 599 ntBASIC17.41■□□□□ 0.38
Pcdh15Q99PJ1 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdh15Q99PJ1 AY702102-202ENSMUST00000194651 1173 ntBASIC17.41■□□□□ 0.38
Pcdh15Q99PJ1 Gm43630-201ENSMUST00000201550 776 ntBASIC17.41■□□□□ 0.38
Pcdh15Q99PJ1 AC164567.1-201ENSMUST00000219185 960 ntBASIC17.41■□□□□ 0.38
Pcdh15Q99PJ1 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Pcdh15Q99PJ1 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC17.41■□□□□ 0.38
Pcdh15Q99PJ1 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdh15Q99PJ1 Gm6598-201ENSMUST00000202719 2615 ntBASIC17.4■□□□□ 0.38
Pcdh15Q99PJ1 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdh15Q99PJ1 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Pcdh15Q99PJ1 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdh15Q99PJ1 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdh15Q99PJ1 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdh15Q99PJ1 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdh15Q99PJ1 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Pcdh15Q99PJ1 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC17.4■□□□□ 0.38
Pcdh15Q99PJ1 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Pcdh15Q99PJ1 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Pcdh15Q99PJ1 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdh15Q99PJ1 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdh15Q99PJ1 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdh15Q99PJ1 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Pcdh15Q99PJ1 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC17.4■□□□□ 0.38
Pcdh15Q99PJ1 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Pcdh15Q99PJ1 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Pcdh15Q99PJ1 Gm43702-201ENSMUST00000198772 2546 ntBASIC17.39■□□□□ 0.38
Pcdh15Q99PJ1 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Pcdh15Q99PJ1 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Pcdh15Q99PJ1 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdh15Q99PJ1 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdh15Q99PJ1 Cd63-ps-201ENSMUST00000145417 875 ntBASIC17.39■□□□□ 0.37
Pcdh15Q99PJ1 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC17.39■□□□□ 0.37
Pcdh15Q99PJ1 AC238811.1-201ENSMUST00000225302 441 ntBASIC17.39■□□□□ 0.37
Pcdh15Q99PJ1 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdh15Q99PJ1 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdh15Q99PJ1 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdh15Q99PJ1 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdh15Q99PJ1 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
Pcdh15Q99PJ1 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdh15Q99PJ1 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdh15Q99PJ1 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Pcdh15Q99PJ1 Gm21854-201ENSMUST00000179901 471 ntBASIC17.39■□□□□ 0.37
Pcdh15Q99PJ1 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC17.39■□□□□ 0.37
Pcdh15Q99PJ1 AC090659.2-201ENSMUST00000225378 1186 ntBASIC17.39■□□□□ 0.37
Pcdh15Q99PJ1 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC17.39■□□□□ 0.37
Pcdh15Q99PJ1 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdh15Q99PJ1 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdh15Q99PJ1 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdh15Q99PJ1 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC17.39■□□□□ 0.37
Pcdh15Q99PJ1 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdh15Q99PJ1 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdh15Q99PJ1 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdh15Q99PJ1 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Pcdh15Q99PJ1 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdh15Q99PJ1 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Pcdh15Q99PJ1 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Pcdh15Q99PJ1 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdh15Q99PJ1 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdh15Q99PJ1 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdh15Q99PJ1 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdh15Q99PJ1 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdh15Q99PJ1 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdh15Q99PJ1 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC17.38■□□□□ 0.37
Pcdh15Q99PJ1 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC17.38■□□□□ 0.37
Pcdh15Q99PJ1 Gm12091-201ENSMUST00000146791 830 ntBASIC17.38■□□□□ 0.37
Pcdh15Q99PJ1 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdh15Q99PJ1 Gm5479-201ENSMUST00000160578 435 ntBASIC17.38■□□□□ 0.37
Pcdh15Q99PJ1 Gm8602-201ENSMUST00000184045 607 ntBASIC17.38■□□□□ 0.37
Pcdh15Q99PJ1 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdh15Q99PJ1 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC17.38■□□□□ 0.37
Pcdh15Q99PJ1 Gm18624-201ENSMUST00000220966 658 ntBASIC17.38■□□□□ 0.37
Pcdh15Q99PJ1 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdh15Q99PJ1 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdh15Q99PJ1 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdh15Q99PJ1 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdh15Q99PJ1 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdh15Q99PJ1 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Pcdh15Q99PJ1 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdh15Q99PJ1 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdh15Q99PJ1 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdh15Q99PJ1 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdh15Q99PJ1 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdh15Q99PJ1 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms