Protein–RNA interactions for Protein: Q99P72

Rtn4, Reticulon-4, mousemouse

Known RBP Predictions only

Length 1,162 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4Q99P72 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rtn4Q99P72 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rtn4Q99P72 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC19.9■□□□□ 0.78
Rtn4Q99P72 Gm36943-201ENSMUST00000194422 282 ntBASIC19.9■□□□□ 0.78
Rtn4Q99P72 Rbfox2-207ENSMUST00000227533 1041 ntBASIC19.9■□□□□ 0.78
Rtn4Q99P72 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rtn4Q99P72 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rtn4Q99P72 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rtn4Q99P72 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Rtn4Q99P72 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Rtn4Q99P72 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rtn4Q99P72 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rtn4Q99P72 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rtn4Q99P72 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rtn4Q99P72 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rtn4Q99P72 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rtn4Q99P72 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Rtn4Q99P72 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
Rtn4Q99P72 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC19.89■□□□□ 0.78
Rtn4Q99P72 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
Rtn4Q99P72 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.78
Rtn4Q99P72 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Rtn4Q99P72 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
Rtn4Q99P72 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
Rtn4Q99P72 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rtn4Q99P72 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC19.89■□□□□ 0.77
Rtn4Q99P72 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Rtn4Q99P72 Gm38157-201ENSMUST00000194178 1698 ntBASIC19.89■□□□□ 0.77
Rtn4Q99P72 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC19.89■□□□□ 0.77
Rtn4Q99P72 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC19.89■□□□□ 0.77
Rtn4Q99P72 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC19.89■□□□□ 0.77
Rtn4Q99P72 Vti1a-206ENSMUST00000225529 1244 ntBASIC19.89■□□□□ 0.77
Rtn4Q99P72 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rtn4Q99P72 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rtn4Q99P72 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC19.89■□□□□ 0.77
Rtn4Q99P72 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Rtn4Q99P72 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC19.88■□□□□ 0.77
Rtn4Q99P72 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rtn4Q99P72 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Rtn4Q99P72 Lgi1-204ENSMUST00000196090 1789 ntTSL 5 BASIC19.88■□□□□ 0.77
Rtn4Q99P72 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rtn4Q99P72 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Rtn4Q99P72 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC19.88■□□□□ 0.77
Rtn4Q99P72 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rtn4Q99P72 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Rtn4Q99P72 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rtn4Q99P72 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rtn4Q99P72 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rtn4Q99P72 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rtn4Q99P72 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC19.88■□□□□ 0.77
Rtn4Q99P72 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC19.88■□□□□ 0.77
Rtn4Q99P72 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC19.88■□□□□ 0.77
Rtn4Q99P72 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Rtn4Q99P72 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rtn4Q99P72 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Rtn4Q99P72 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rtn4Q99P72 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rtn4Q99P72 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rtn4Q99P72 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rtn4Q99P72 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC19.87■□□□□ 0.77
Rtn4Q99P72 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rtn4Q99P72 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Rtn4Q99P72 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rtn4Q99P72 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Rtn4Q99P72 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Rtn4Q99P72 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rtn4Q99P72 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC19.87■□□□□ 0.77
Rtn4Q99P72 Gm4459-201ENSMUST00000118750 468 ntBASIC19.87■□□□□ 0.77
Rtn4Q99P72 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Rtn4Q99P72 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rtn4Q99P72 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rtn4Q99P72 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC19.87■□□□□ 0.77
Rtn4Q99P72 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Rtn4Q99P72 Gm38216-201ENSMUST00000194872 1214 ntBASIC19.87■□□□□ 0.77
Rtn4Q99P72 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rtn4Q99P72 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Rtn4Q99P72 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rtn4Q99P72 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Rtn4Q99P72 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rtn4Q99P72 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Rtn4Q99P72 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC19.87■□□□□ 0.77
Rtn4Q99P72 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rtn4Q99P72 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rtn4Q99P72 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rtn4Q99P72 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rtn4Q99P72 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Rtn4Q99P72 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rtn4Q99P72 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rtn4Q99P72 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Rtn4Q99P72 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Rtn4Q99P72 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rtn4Q99P72 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rtn4Q99P72 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC19.86■□□□□ 0.77
Rtn4Q99P72 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rtn4Q99P72 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rtn4Q99P72 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Rtn4Q99P72 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC19.86■□□□□ 0.77
Rtn4Q99P72 Gm36967-201ENSMUST00000193814 266 ntBASIC19.86■□□□□ 0.77
Rtn4Q99P72 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC19.86■□□□□ 0.77
Rtn4Q99P72 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC19.86■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms