Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Col25a1Q99MQ5 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Col25a1Q99MQ5 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Col25a1Q99MQ5 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Col25a1Q99MQ5 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Col25a1Q99MQ5 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Col25a1Q99MQ5 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Col25a1Q99MQ5 AC124751.1-201ENSMUST00000222716 1408 ntBASIC16.08■□□□□ 0.16
Col25a1Q99MQ5 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Col25a1Q99MQ5 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Col25a1Q99MQ5 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC16.08■□□□□ 0.16
Col25a1Q99MQ5 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Col25a1Q99MQ5 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Col25a1Q99MQ5 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Col25a1Q99MQ5 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Col25a1Q99MQ5 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Col25a1Q99MQ5 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Col25a1Q99MQ5 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Col25a1Q99MQ5 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Col25a1Q99MQ5 Gm36858-201ENSMUST00000194501 2391 ntBASIC16.07■□□□□ 0.16
Col25a1Q99MQ5 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Col25a1Q99MQ5 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Col25a1Q99MQ5 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Col25a1Q99MQ5 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Col25a1Q99MQ5 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Col25a1Q99MQ5 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Col25a1Q99MQ5 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Col25a1Q99MQ5 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
Col25a1Q99MQ5 Gm13453-201ENSMUST00000118708 357 ntBASIC16.07■□□□□ 0.16
Col25a1Q99MQ5 Gm12138-201ENSMUST00000122180 951 ntBASIC16.07■□□□□ 0.16
Col25a1Q99MQ5 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC16.07■□□□□ 0.16
Col25a1Q99MQ5 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Col25a1Q99MQ5 Gm23984-201ENSMUST00000157139 203 ntBASIC16.07■□□□□ 0.16
Col25a1Q99MQ5 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC16.07■□□□□ 0.16
Col25a1Q99MQ5 Ighv5-13-201ENSMUST00000193550 290 ntBASIC16.07■□□□□ 0.16
Col25a1Q99MQ5 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC16.07■□□□□ 0.16
Col25a1Q99MQ5 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Col25a1Q99MQ5 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Col25a1Q99MQ5 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Col25a1Q99MQ5 AC126250.1-201ENSMUST00000228343 1768 ntBASIC16.07■□□□□ 0.16
Col25a1Q99MQ5 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Col25a1Q99MQ5 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Col25a1Q99MQ5 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Col25a1Q99MQ5 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Col25a1Q99MQ5 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Col25a1Q99MQ5 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Col25a1Q99MQ5 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Col25a1Q99MQ5 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
Col25a1Q99MQ5 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Col25a1Q99MQ5 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Col25a1Q99MQ5 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Col25a1Q99MQ5 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC16.06■□□□□ 0.16
Col25a1Q99MQ5 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Col25a1Q99MQ5 Gm25406-201ENSMUST00000157599 105 ntBASIC16.06■□□□□ 0.16
Col25a1Q99MQ5 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Col25a1Q99MQ5 Gm7787-201ENSMUST00000216858 688 ntBASIC16.06■□□□□ 0.16
Col25a1Q99MQ5 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Col25a1Q99MQ5 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Col25a1Q99MQ5 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Col25a1Q99MQ5 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Col25a1Q99MQ5 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Col25a1Q99MQ5 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Col25a1Q99MQ5 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Col25a1Q99MQ5 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Col25a1Q99MQ5 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Col25a1Q99MQ5 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Col25a1Q99MQ5 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Col25a1Q99MQ5 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Col25a1Q99MQ5 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Col25a1Q99MQ5 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Col25a1Q99MQ5 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Col25a1Q99MQ5 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Col25a1Q99MQ5 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Col25a1Q99MQ5 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Col25a1Q99MQ5 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Col25a1Q99MQ5 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
Col25a1Q99MQ5 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC16.05■□□□□ 0.16
Col25a1Q99MQ5 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Col25a1Q99MQ5 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Col25a1Q99MQ5 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Col25a1Q99MQ5 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Col25a1Q99MQ5 AL593843.1-201ENSMUST00000195891 145 ntBASIC16.05■□□□□ 0.16
Col25a1Q99MQ5 Gm18622-201ENSMUST00000219361 595 ntBASIC16.05■□□□□ 0.16
Col25a1Q99MQ5 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Col25a1Q99MQ5 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Col25a1Q99MQ5 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Col25a1Q99MQ5 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Col25a1Q99MQ5 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Col25a1Q99MQ5 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Col25a1Q99MQ5 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Col25a1Q99MQ5 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Col25a1Q99MQ5 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Col25a1Q99MQ5 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Col25a1Q99MQ5 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Col25a1Q99MQ5 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Col25a1Q99MQ5 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.16
Col25a1Q99MQ5 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Col25a1Q99MQ5 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Col25a1Q99MQ5 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Col25a1Q99MQ5 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms