Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rnf111Q99ML9 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Rnf111Q99ML9 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rnf111Q99ML9 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
Rnf111Q99ML9 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Rnf111Q99ML9 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rnf111Q99ML9 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rnf111Q99ML9 Gm15794-201ENSMUST00000120182 631 ntBASIC15.12■□□□□ 0.01
Rnf111Q99ML9 Gm7284-201ENSMUST00000131667 944 ntBASIC15.12■□□□□ 0.01
Rnf111Q99ML9 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Rnf111Q99ML9 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC15.12■□□□□ 0.01
Rnf111Q99ML9 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
Rnf111Q99ML9 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
Rnf111Q99ML9 CT009713.7-201ENSMUST00000224689 571 ntBASIC15.12■□□□□ 0.01
Rnf111Q99ML9 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rnf111Q99ML9 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rnf111Q99ML9 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Rnf111Q99ML9 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Rnf111Q99ML9 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rnf111Q99ML9 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rnf111Q99ML9 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Rnf111Q99ML9 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rnf111Q99ML9 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rnf111Q99ML9 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rnf111Q99ML9 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC15.12■□□□□ 0.01
Rnf111Q99ML9 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rnf111Q99ML9 Gm11960-202ENSMUST00000181063 2858 ntBASIC15.12■□□□□ 0.01
Rnf111Q99ML9 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rnf111Q99ML9 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC15.12■□□□□ 0.01
Rnf111Q99ML9 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC15.12■□□□□ 0.01
Rnf111Q99ML9 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rnf111Q99ML9 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rnf111Q99ML9 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rnf111Q99ML9 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rnf111Q99ML9 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rnf111Q99ML9 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rnf111Q99ML9 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rnf111Q99ML9 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rnf111Q99ML9 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rnf111Q99ML9 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rnf111Q99ML9 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rnf111Q99ML9 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rnf111Q99ML9 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rnf111Q99ML9 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rnf111Q99ML9 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rnf111Q99ML9 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Rnf111Q99ML9 Gm21362-201ENSMUST00000194272 928 ntBASIC15.11■□□□□ 0.01
Rnf111Q99ML9 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Rnf111Q99ML9 AC154471.1-201ENSMUST00000224418 436 ntBASIC15.11■□□□□ 0.01
Rnf111Q99ML9 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rnf111Q99ML9 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rnf111Q99ML9 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rnf111Q99ML9 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rnf111Q99ML9 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC15.11■□□□□ 0.01
Rnf111Q99ML9 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rnf111Q99ML9 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Rnf111Q99ML9 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rnf111Q99ML9 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Rnf111Q99ML9 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rnf111Q99ML9 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rnf111Q99ML9 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Rnf111Q99ML9 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rnf111Q99ML9 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
Rnf111Q99ML9 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rnf111Q99ML9 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rnf111Q99ML9 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rnf111Q99ML9 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Rnf111Q99ML9 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rnf111Q99ML9 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rnf111Q99ML9 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rnf111Q99ML9 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rnf111Q99ML9 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rnf111Q99ML9 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rnf111Q99ML9 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rnf111Q99ML9 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC15.1■□□□□ 0.01
Rnf111Q99ML9 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rnf111Q99ML9 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rnf111Q99ML9 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Rnf111Q99ML9 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC15.1■□□□□ 0.01
Rnf111Q99ML9 Gm27704-201ENSMUST00000185094 107 ntBASIC15.1■□□□□ 0.01
Rnf111Q99ML9 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rnf111Q99ML9 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rnf111Q99ML9 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rnf111Q99ML9 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rnf111Q99ML9 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rnf111Q99ML9 Gm37305-201ENSMUST00000195714 4279 ntBASIC15.1■□□□□ 0.01
Rnf111Q99ML9 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rnf111Q99ML9 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rnf111Q99ML9 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rnf111Q99ML9 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC15.09■□□□□ 0.01
Rnf111Q99ML9 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Rnf111Q99ML9 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rnf111Q99ML9 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC15.09■□□□□ 0.01
Rnf111Q99ML9 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rnf111Q99ML9 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC15.09■□□□□ 0.01
Rnf111Q99ML9 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rnf111Q99ML9 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rnf111Q99ML9 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rnf111Q99ML9 Gm27742-201ENSMUST00000184667 60 ntBASIC15.09■□□□□ 0.01
Rnf111Q99ML9 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC15.09■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms