Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Gm13410-201ENSMUST00000117058 1415 ntBASIC14.55□□□□□ -0.08
Nkx6-1Q99MA9 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Nkx6-1Q99MA9 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nkx6-1Q99MA9 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC14.55□□□□□ -0.08
Nkx6-1Q99MA9 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nkx6-1Q99MA9 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC14.55□□□□□ -0.08
Nkx6-1Q99MA9 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Nkx6-1Q99MA9 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nkx6-1Q99MA9 Nudt18-203ENSMUST00000228768 1578 ntBASIC14.55□□□□□ -0.08
Nkx6-1Q99MA9 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Nkx6-1Q99MA9 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nkx6-1Q99MA9 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nkx6-1Q99MA9 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC14.55□□□□□ -0.08
Nkx6-1Q99MA9 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nkx6-1Q99MA9 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nkx6-1Q99MA9 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Nkx6-1Q99MA9 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC14.54□□□□□ -0.08
Nkx6-1Q99MA9 Wnt10b-206ENSMUST00000228546 2709 ntBASIC14.54□□□□□ -0.08
Nkx6-1Q99MA9 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nkx6-1Q99MA9 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nkx6-1Q99MA9 Gm6257-201ENSMUST00000163864 910 ntBASIC14.54□□□□□ -0.08
Nkx6-1Q99MA9 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC14.54□□□□□ -0.08
Nkx6-1Q99MA9 AC125206.2-201ENSMUST00000217454 574 ntBASIC14.54□□□□□ -0.08
Nkx6-1Q99MA9 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Nkx6-1Q99MA9 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Nkx6-1Q99MA9 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC14.54□□□□□ -0.08
Nkx6-1Q99MA9 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nkx6-1Q99MA9 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nkx6-1Q99MA9 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nkx6-1Q99MA9 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nkx6-1Q99MA9 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nkx6-1Q99MA9 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nkx6-1Q99MA9 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nkx6-1Q99MA9 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nkx6-1Q99MA9 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nkx6-1Q99MA9 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nkx6-1Q99MA9 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nkx6-1Q99MA9 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nkx6-1Q99MA9 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nkx6-1Q99MA9 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nkx6-1Q99MA9 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nkx6-1Q99MA9 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Nkx6-1Q99MA9 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nkx6-1Q99MA9 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nkx6-1Q99MA9 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nkx6-1Q99MA9 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nkx6-1Q99MA9 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nkx6-1Q99MA9 Gm5866-201ENSMUST00000177881 973 ntBASIC14.53□□□□□ -0.08
Nkx6-1Q99MA9 Gm27437-201ENSMUST00000183429 107 ntBASIC14.53□□□□□ -0.08
Nkx6-1Q99MA9 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC14.53□□□□□ -0.08
Nkx6-1Q99MA9 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nkx6-1Q99MA9 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Nkx6-1Q99MA9 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nkx6-1Q99MA9 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Nkx6-1Q99MA9 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
Nkx6-1Q99MA9 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nkx6-1Q99MA9 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nkx6-1Q99MA9 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nkx6-1Q99MA9 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC14.53□□□□□ -0.08
Nkx6-1Q99MA9 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Nkx6-1Q99MA9 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nkx6-1Q99MA9 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nkx6-1Q99MA9 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Nkx6-1Q99MA9 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.08
Nkx6-1Q99MA9 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Nkx6-1Q99MA9 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Nkx6-1Q99MA9 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Nkx6-1Q99MA9 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Nkx6-1Q99MA9 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Nkx6-1Q99MA9 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC14.52□□□□□ -0.08
Nkx6-1Q99MA9 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Nkx6-1Q99MA9 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Nkx6-1Q99MA9 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Nkx6-1Q99MA9 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Nkx6-1Q99MA9 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Nkx6-1Q99MA9 Gm22065-201ENSMUST00000103753 110 ntBASIC14.52□□□□□ -0.09
Nkx6-1Q99MA9 Gm22066-201ENSMUST00000103761 110 ntBASIC14.52□□□□□ -0.09
Nkx6-1Q99MA9 Gm24932-201ENSMUST00000103763 110 ntBASIC14.52□□□□□ -0.09
Nkx6-1Q99MA9 Gm24115-201ENSMUST00000103799 110 ntBASIC14.52□□□□□ -0.09
Nkx6-1Q99MA9 Gm22190-201ENSMUST00000103827 110 ntBASIC14.52□□□□□ -0.09
Nkx6-1Q99MA9 Gm22191-201ENSMUST00000103831 110 ntBASIC14.52□□□□□ -0.09
Nkx6-1Q99MA9 Gm24721-201ENSMUST00000103849 110 ntBASIC14.52□□□□□ -0.09
Nkx6-1Q99MA9 Gm28018-201ENSMUST00000103869 110 ntBASIC14.52□□□□□ -0.09
Nkx6-1Q99MA9 Gm26399-201ENSMUST00000103937 110 ntBASIC14.52□□□□□ -0.09
Nkx6-1Q99MA9 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Nkx6-1Q99MA9 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Nkx6-1Q99MA9 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC14.52□□□□□ -0.09
Nkx6-1Q99MA9 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Nkx6-1Q99MA9 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC14.52□□□□□ -0.09
Nkx6-1Q99MA9 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Nkx6-1Q99MA9 Gm25349-201ENSMUST00000177728 110 ntBASIC14.52□□□□□ -0.09
Nkx6-1Q99MA9 Gm23616-201ENSMUST00000177797 110 ntBASIC14.52□□□□□ -0.09
Nkx6-1Q99MA9 Gm25871-201ENSMUST00000177816 110 ntBASIC14.52□□□□□ -0.09
Nkx6-1Q99MA9 Gm24752-201ENSMUST00000178240 110 ntBASIC14.52□□□□□ -0.09
Nkx6-1Q99MA9 Gm24496-201ENSMUST00000178287 110 ntBASIC14.52□□□□□ -0.09
Nkx6-1Q99MA9 Gm25649-201ENSMUST00000178476 110 ntBASIC14.52□□□□□ -0.09
Nkx6-1Q99MA9 Gm25548-201ENSMUST00000178681 110 ntBASIC14.52□□□□□ -0.09
Nkx6-1Q99MA9 Gm23147-201ENSMUST00000178841 110 ntBASIC14.52□□□□□ -0.09
Nkx6-1Q99MA9 Gm26095-201ENSMUST00000179270 110 ntBASIC14.52□□□□□ -0.09
Nkx6-1Q99MA9 Gm22171-201ENSMUST00000179283 110 ntBASIC14.52□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms