Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Scrt1Q99M85 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Scrt1Q99M85 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
Scrt1Q99M85 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Scrt1Q99M85 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC13.62□□□□□ -0.23
Scrt1Q99M85 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Scrt1Q99M85 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Scrt1Q99M85 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Scrt1Q99M85 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Scrt1Q99M85 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Scrt1Q99M85 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Scrt1Q99M85 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
Scrt1Q99M85 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC13.62□□□□□ -0.23
Scrt1Q99M85 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC13.62□□□□□ -0.23
Scrt1Q99M85 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC13.62□□□□□ -0.23
Scrt1Q99M85 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Scrt1Q99M85 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Scrt1Q99M85 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Scrt1Q99M85 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Scrt1Q99M85 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Scrt1Q99M85 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC13.62□□□□□ -0.23
Scrt1Q99M85 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Scrt1Q99M85 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Scrt1Q99M85 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Scrt1Q99M85 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Scrt1Q99M85 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
Scrt1Q99M85 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Scrt1Q99M85 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Scrt1Q99M85 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Scrt1Q99M85 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Scrt1Q99M85 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Scrt1Q99M85 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Scrt1Q99M85 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC13.61□□□□□ -0.23
Scrt1Q99M85 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scrt1Q99M85 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scrt1Q99M85 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC13.61□□□□□ -0.23
Scrt1Q99M85 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scrt1Q99M85 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scrt1Q99M85 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scrt1Q99M85 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scrt1Q99M85 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scrt1Q99M85 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Scrt1Q99M85 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scrt1Q99M85 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC13.61□□□□□ -0.23
Scrt1Q99M85 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Scrt1Q99M85 Gm25406-201ENSMUST00000157599 105 ntBASIC13.61□□□□□ -0.23
Scrt1Q99M85 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Scrt1Q99M85 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scrt1Q99M85 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC13.61□□□□□ -0.23
Scrt1Q99M85 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scrt1Q99M85 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scrt1Q99M85 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Scrt1Q99M85 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scrt1Q99M85 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Scrt1Q99M85 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scrt1Q99M85 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scrt1Q99M85 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scrt1Q99M85 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scrt1Q99M85 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scrt1Q99M85 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scrt1Q99M85 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Scrt1Q99M85 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scrt1Q99M85 Gm11873-201ENSMUST00000117877 1304 ntBASIC13.61□□□□□ -0.23
Scrt1Q99M85 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Scrt1Q99M85 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Scrt1Q99M85 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scrt1Q99M85 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scrt1Q99M85 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Scrt1Q99M85 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scrt1Q99M85 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Scrt1Q99M85 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Scrt1Q99M85 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC13.6□□□□□ -0.23
Scrt1Q99M85 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Scrt1Q99M85 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Scrt1Q99M85 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Scrt1Q99M85 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Scrt1Q99M85 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC13.6□□□□□ -0.23
Scrt1Q99M85 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Scrt1Q99M85 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC13.6□□□□□ -0.23
Scrt1Q99M85 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Scrt1Q99M85 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Scrt1Q99M85 Gm17271-201ENSMUST00000165535 355 ntBASIC13.6□□□□□ -0.23
Scrt1Q99M85 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Scrt1Q99M85 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC13.6□□□□□ -0.23
Scrt1Q99M85 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Scrt1Q99M85 Gm44872-201ENSMUST00000207864 420 ntBASIC13.6□□□□□ -0.23
Scrt1Q99M85 Gm45167-201ENSMUST00000208007 322 ntBASIC13.6□□□□□ -0.23
Scrt1Q99M85 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC13.6□□□□□ -0.23
Scrt1Q99M85 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Scrt1Q99M85 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Scrt1Q99M85 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Scrt1Q99M85 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Scrt1Q99M85 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Scrt1Q99M85 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC13.6□□□□□ -0.23
Scrt1Q99M85 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Scrt1Q99M85 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Scrt1Q99M85 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC13.6□□□□□ -0.23
Scrt1Q99M85 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Scrt1Q99M85 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Scrt1Q99M85 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms