Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Chmp1b1Q99LU0 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Chmp1b1Q99LU0 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC14.73□□□□□ -0.05
Chmp1b1Q99LU0 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC14.73□□□□□ -0.05
Chmp1b1Q99LU0 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Chmp1b1Q99LU0 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Chmp1b1Q99LU0 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Chmp1b1Q99LU0 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC14.73□□□□□ -0.05
Chmp1b1Q99LU0 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Chmp1b1Q99LU0 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Chmp1b1Q99LU0 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Chmp1b1Q99LU0 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Chmp1b1Q99LU0 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
Chmp1b1Q99LU0 Gm9103-201ENSMUST00000119371 405 ntBASIC14.73□□□□□ -0.05
Chmp1b1Q99LU0 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Chmp1b1Q99LU0 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC14.73□□□□□ -0.05
Chmp1b1Q99LU0 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Chmp1b1Q99LU0 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Chmp1b1Q99LU0 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Chmp1b1Q99LU0 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Chmp1b1Q99LU0 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Chmp1b1Q99LU0 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Chmp1b1Q99LU0 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Chmp1b1Q99LU0 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Chmp1b1Q99LU0 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Chmp1b1Q99LU0 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Chmp1b1Q99LU0 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Chmp1b1Q99LU0 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC14.73□□□□□ -0.05
Chmp1b1Q99LU0 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC14.73□□□□□ -0.05
Chmp1b1Q99LU0 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Chmp1b1Q99LU0 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Chmp1b1Q99LU0 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Chmp1b1Q99LU0 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Chmp1b1Q99LU0 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Chmp1b1Q99LU0 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC14.72□□□□□ -0.05
Chmp1b1Q99LU0 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Chmp1b1Q99LU0 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Chmp1b1Q99LU0 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Chmp1b1Q99LU0 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC14.72□□□□□ -0.05
Chmp1b1Q99LU0 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Chmp1b1Q99LU0 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC14.72□□□□□ -0.05
Chmp1b1Q99LU0 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Chmp1b1Q99LU0 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Chmp1b1Q99LU0 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Chmp1b1Q99LU0 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Chmp1b1Q99LU0 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Chmp1b1Q99LU0 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Chmp1b1Q99LU0 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Chmp1b1Q99LU0 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Chmp1b1Q99LU0 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Chmp1b1Q99LU0 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Chmp1b1Q99LU0 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Chmp1b1Q99LU0 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Chmp1b1Q99LU0 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Chmp1b1Q99LU0 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Chmp1b1Q99LU0 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC14.72□□□□□ -0.05
Chmp1b1Q99LU0 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Chmp1b1Q99LU0 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Chmp1b1Q99LU0 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Chmp1b1Q99LU0 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Chmp1b1Q99LU0 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Chmp1b1Q99LU0 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Chmp1b1Q99LU0 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Chmp1b1Q99LU0 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Chmp1b1Q99LU0 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Chmp1b1Q99LU0 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC14.71□□□□□ -0.05
Chmp1b1Q99LU0 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Chmp1b1Q99LU0 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Chmp1b1Q99LU0 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Chmp1b1Q99LU0 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Chmp1b1Q99LU0 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Chmp1b1Q99LU0 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC14.71□□□□□ -0.05
Chmp1b1Q99LU0 Olfr129-201ENSMUST00000122318 993 ntBASIC14.71□□□□□ -0.05
Chmp1b1Q99LU0 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC14.71□□□□□ -0.05
Chmp1b1Q99LU0 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC14.71□□□□□ -0.05
Chmp1b1Q99LU0 Rprl3-201ENSMUST00000157400 290 ntBASIC14.71□□□□□ -0.05
Chmp1b1Q99LU0 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Chmp1b1Q99LU0 Ank2-226ENSMUST00000189368 339 ntBASIC14.71□□□□□ -0.05
Chmp1b1Q99LU0 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC14.71□□□□□ -0.05
Chmp1b1Q99LU0 Otx2os1-206ENSMUST00000228153 787 ntBASIC14.71□□□□□ -0.05
Chmp1b1Q99LU0 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Chmp1b1Q99LU0 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Chmp1b1Q99LU0 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC14.71□□□□□ -0.05
Chmp1b1Q99LU0 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Chmp1b1Q99LU0 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Chmp1b1Q99LU0 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Chmp1b1Q99LU0 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Chmp1b1Q99LU0 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Chmp1b1Q99LU0 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Chmp1b1Q99LU0 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC14.71□□□□□ -0.06
Chmp1b1Q99LU0 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Chmp1b1Q99LU0 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Chmp1b1Q99LU0 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC14.7□□□□□ -0.06
Chmp1b1Q99LU0 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Chmp1b1Q99LU0 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC14.7□□□□□ -0.06
Chmp1b1Q99LU0 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Chmp1b1Q99LU0 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Chmp1b1Q99LU0 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Chmp1b1Q99LU0 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Chmp1b1Q99LU0 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC14.7□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms