Protein–RNA interactions for Protein: Q91XZ5

Pcdhb5, Protocadherin beta 5, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb5Q91XZ5 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhb5Q91XZ5 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhb5Q91XZ5 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhb5Q91XZ5 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhb5Q91XZ5 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhb5Q91XZ5 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhb5Q91XZ5 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC18.27■□□□□ 0.52
Pcdhb5Q91XZ5 Gm44335-201ENSMUST00000196879 141 ntBASIC18.27■□□□□ 0.52
Pcdhb5Q91XZ5 Gm44297-201ENSMUST00000198304 141 ntBASIC18.27■□□□□ 0.52
Pcdhb5Q91XZ5 Gm44346-201ENSMUST00000198851 141 ntBASIC18.27■□□□□ 0.52
Pcdhb5Q91XZ5 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhb5Q91XZ5 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhb5Q91XZ5 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC18.27■□□□□ 0.52
Pcdhb5Q91XZ5 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC18.27■□□□□ 0.52
Pcdhb5Q91XZ5 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhb5Q91XZ5 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Pcdhb5Q91XZ5 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Pcdhb5Q91XZ5 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Pcdhb5Q91XZ5 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
Pcdhb5Q91XZ5 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC18.27■□□□□ 0.51
Pcdhb5Q91XZ5 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Pcdhb5Q91XZ5 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Pcdhb5Q91XZ5 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhb5Q91XZ5 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Pcdhb5Q91XZ5 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Pcdhb5Q91XZ5 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Pcdhb5Q91XZ5 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC18.26■□□□□ 0.51
Pcdhb5Q91XZ5 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhb5Q91XZ5 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhb5Q91XZ5 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhb5Q91XZ5 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC18.26■□□□□ 0.51
Pcdhb5Q91XZ5 Gm20553-201ENSMUST00000204205 844 ntBASIC18.26■□□□□ 0.51
Pcdhb5Q91XZ5 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC18.26■□□□□ 0.51
Pcdhb5Q91XZ5 Gm44872-201ENSMUST00000207864 420 ntBASIC18.26■□□□□ 0.51
Pcdhb5Q91XZ5 AC139382.1-201ENSMUST00000221402 498 ntBASIC18.26■□□□□ 0.51
Pcdhb5Q91XZ5 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhb5Q91XZ5 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhb5Q91XZ5 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Pcdhb5Q91XZ5 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhb5Q91XZ5 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhb5Q91XZ5 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhb5Q91XZ5 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Pcdhb5Q91XZ5 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhb5Q91XZ5 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC18.25■□□□□ 0.51
Pcdhb5Q91XZ5 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Pcdhb5Q91XZ5 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhb5Q91XZ5 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhb5Q91XZ5 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhb5Q91XZ5 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhb5Q91XZ5 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC18.25■□□□□ 0.51
Pcdhb5Q91XZ5 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhb5Q91XZ5 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC18.25■□□□□ 0.51
Pcdhb5Q91XZ5 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhb5Q91XZ5 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC18.25■□□□□ 0.51
Pcdhb5Q91XZ5 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhb5Q91XZ5 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC18.25■□□□□ 0.51
Pcdhb5Q91XZ5 Gm11745-201ENSMUST00000121669 448 ntBASIC18.25■□□□□ 0.51
Pcdhb5Q91XZ5 Gm10499-201ENSMUST00000174094 934 ntBASIC18.25■□□□□ 0.51
Pcdhb5Q91XZ5 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhb5Q91XZ5 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhb5Q91XZ5 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhb5Q91XZ5 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhb5Q91XZ5 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhb5Q91XZ5 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC18.24■□□□□ 0.51
Pcdhb5Q91XZ5 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhb5Q91XZ5 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhb5Q91XZ5 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhb5Q91XZ5 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhb5Q91XZ5 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Pcdhb5Q91XZ5 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC18.24■□□□□ 0.51
Pcdhb5Q91XZ5 Gm9385-201ENSMUST00000117563 472 ntBASIC18.24■□□□□ 0.51
Pcdhb5Q91XZ5 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC18.24■□□□□ 0.51
Pcdhb5Q91XZ5 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
Pcdhb5Q91XZ5 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhb5Q91XZ5 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhb5Q91XZ5 Gm7292-201ENSMUST00000194706 2527 ntBASIC18.24■□□□□ 0.51
Pcdhb5Q91XZ5 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Pcdhb5Q91XZ5 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhb5Q91XZ5 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhb5Q91XZ5 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhb5Q91XZ5 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhb5Q91XZ5 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhb5Q91XZ5 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhb5Q91XZ5 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhb5Q91XZ5 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhb5Q91XZ5 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhb5Q91XZ5 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhb5Q91XZ5 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhb5Q91XZ5 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhb5Q91XZ5 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhb5Q91XZ5 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
Pcdhb5Q91XZ5 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Pcdhb5Q91XZ5 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhb5Q91XZ5 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhb5Q91XZ5 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhb5Q91XZ5 Mir6956-201ENSMUST00000183598 62 ntBASIC18.23■□□□□ 0.51
Pcdhb5Q91XZ5 Gm5312-201ENSMUST00000203728 547 ntBASIC18.23■□□□□ 0.51
Pcdhb5Q91XZ5 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC18.23■□□□□ 0.51
Pcdhb5Q91XZ5 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhb5Q91XZ5 Gpr146-202ENSMUST00000053120 1040 ntBASIC18.23■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms