Protein–RNA interactions for Protein: Q91XX9

Pcdhga9, Protocadherin gamma A9, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga9Q91XX9 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC15.38■□□□□ 0.05
Pcdhga9Q91XX9 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC15.38■□□□□ 0.05
Pcdhga9Q91XX9 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Pcdhga9Q91XX9 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC15.38■□□□□ 0.05
Pcdhga9Q91XX9 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC15.38■□□□□ 0.05
Pcdhga9Q91XX9 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhga9Q91XX9 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhga9Q91XX9 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhga9Q91XX9 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhga9Q91XX9 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhga9Q91XX9 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhga9Q91XX9 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhga9Q91XX9 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhga9Q91XX9 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhga9Q91XX9 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhga9Q91XX9 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhga9Q91XX9 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC15.38■□□□□ 0.05
Pcdhga9Q91XX9 AC154231.1-201ENSMUST00000220564 2175 ntBASIC15.38■□□□□ 0.05
Pcdhga9Q91XX9 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhga9Q91XX9 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhga9Q91XX9 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhga9Q91XX9 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhga9Q91XX9 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhga9Q91XX9 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhga9Q91XX9 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Pcdhga9Q91XX9 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhga9Q91XX9 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhga9Q91XX9 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhga9Q91XX9 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhga9Q91XX9 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhga9Q91XX9 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC15.37■□□□□ 0.05
Pcdhga9Q91XX9 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhga9Q91XX9 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC15.37■□□□□ 0.05
Pcdhga9Q91XX9 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhga9Q91XX9 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC15.37■□□□□ 0.05
Pcdhga9Q91XX9 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC15.37■□□□□ 0.05
Pcdhga9Q91XX9 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhga9Q91XX9 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhga9Q91XX9 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Pcdhga9Q91XX9 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhga9Q91XX9 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC15.37■□□□□ 0.05
Pcdhga9Q91XX9 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhga9Q91XX9 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhga9Q91XX9 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhga9Q91XX9 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC15.37■□□□□ 0.05
Pcdhga9Q91XX9 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhga9Q91XX9 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhga9Q91XX9 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhga9Q91XX9 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Pcdhga9Q91XX9 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhga9Q91XX9 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhga9Q91XX9 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhga9Q91XX9 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhga9Q91XX9 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhga9Q91XX9 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhga9Q91XX9 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Pcdhga9Q91XX9 AC163637.1-201ENSMUST00000215491 1894 ntBASIC15.36■□□□□ 0.05
Pcdhga9Q91XX9 Gm1401-201ENSMUST00000122048 772 ntBASIC15.36■□□□□ 0.05
Pcdhga9Q91XX9 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC15.36■□□□□ 0.05
Pcdhga9Q91XX9 Gm27525-201ENSMUST00000184465 107 ntBASIC15.36■□□□□ 0.05
Pcdhga9Q91XX9 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhga9Q91XX9 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC15.36■□□□□ 0.05
Pcdhga9Q91XX9 Gm5712-201ENSMUST00000199748 1043 ntBASIC15.36■□□□□ 0.05
Pcdhga9Q91XX9 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC15.36■□□□□ 0.05
Pcdhga9Q91XX9 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC15.36■□□□□ 0.05
Pcdhga9Q91XX9 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC15.36■□□□□ 0.05
Pcdhga9Q91XX9 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC15.36■□□□□ 0.05
Pcdhga9Q91XX9 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhga9Q91XX9 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhga9Q91XX9 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Pcdhga9Q91XX9 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhga9Q91XX9 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhga9Q91XX9 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhga9Q91XX9 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC15.36■□□□□ 0.05
Pcdhga9Q91XX9 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhga9Q91XX9 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhga9Q91XX9 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhga9Q91XX9 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhga9Q91XX9 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Pcdhga9Q91XX9 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhga9Q91XX9 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhga9Q91XX9 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhga9Q91XX9 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhga9Q91XX9 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Pcdhga9Q91XX9 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhga9Q91XX9 Gm4535-201ENSMUST00000182274 558 ntBASIC15.35■□□□□ 0.05
Pcdhga9Q91XX9 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC15.35■□□□□ 0.05
Pcdhga9Q91XX9 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC15.35■□□□□ 0.05
Pcdhga9Q91XX9 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhga9Q91XX9 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhga9Q91XX9 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Pcdhga9Q91XX9 Gm10355-201ENSMUST00000097146 517 ntBASIC15.35■□□□□ 0.05
Pcdhga9Q91XX9 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhga9Q91XX9 Ccdc166-201ENSMUST00000182172 2584 ntBASIC15.35■□□□□ 0.05
Pcdhga9Q91XX9 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhga9Q91XX9 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC15.35■□□□□ 0.05
Pcdhga9Q91XX9 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC15.35■□□□□ 0.05
Pcdhga9Q91XX9 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Pcdhga9Q91XX9 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhga9Q91XX9 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms