Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ndc1Q8VCB1 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ndc1Q8VCB1 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Ndc1Q8VCB1 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Ndc1Q8VCB1 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ndc1Q8VCB1 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ndc1Q8VCB1 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Ndc1Q8VCB1 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ndc1Q8VCB1 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC14.69□□□□□ -0.06
Ndc1Q8VCB1 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ndc1Q8VCB1 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Ndc1Q8VCB1 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ndc1Q8VCB1 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ndc1Q8VCB1 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
Ndc1Q8VCB1 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC14.68□□□□□ -0.06
Ndc1Q8VCB1 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ndc1Q8VCB1 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ndc1Q8VCB1 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ndc1Q8VCB1 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Ndc1Q8VCB1 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Ndc1Q8VCB1 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ndc1Q8VCB1 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Ndc1Q8VCB1 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Ndc1Q8VCB1 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
Ndc1Q8VCB1 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC14.68□□□□□ -0.06
Ndc1Q8VCB1 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ndc1Q8VCB1 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC14.68□□□□□ -0.06
Ndc1Q8VCB1 Gm27646-201ENSMUST00000183989 110 ntBASIC14.68□□□□□ -0.06
Ndc1Q8VCB1 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC14.68□□□□□ -0.06
Ndc1Q8VCB1 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Ndc1Q8VCB1 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ndc1Q8VCB1 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Ndc1Q8VCB1 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC14.68□□□□□ -0.06
Ndc1Q8VCB1 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ndc1Q8VCB1 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
Ndc1Q8VCB1 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ndc1Q8VCB1 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ndc1Q8VCB1 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ndc1Q8VCB1 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ndc1Q8VCB1 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Ndc1Q8VCB1 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Ndc1Q8VCB1 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ndc1Q8VCB1 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Ndc1Q8VCB1 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ndc1Q8VCB1 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ndc1Q8VCB1 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
Ndc1Q8VCB1 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ndc1Q8VCB1 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ndc1Q8VCB1 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC14.67□□□□□ -0.06
Ndc1Q8VCB1 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ndc1Q8VCB1 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC14.67□□□□□ -0.06
Ndc1Q8VCB1 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC14.67□□□□□ -0.06
Ndc1Q8VCB1 Gm27628-201ENSMUST00000184911 107 ntBASIC14.67□□□□□ -0.06
Ndc1Q8VCB1 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC14.67□□□□□ -0.06
Ndc1Q8VCB1 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC14.67□□□□□ -0.06
Ndc1Q8VCB1 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC14.67□□□□□ -0.06
Ndc1Q8VCB1 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC14.67□□□□□ -0.06
Ndc1Q8VCB1 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC14.67□□□□□ -0.06
Ndc1Q8VCB1 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC14.67□□□□□ -0.06
Ndc1Q8VCB1 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ndc1Q8VCB1 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ndc1Q8VCB1 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Ndc1Q8VCB1 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ndc1Q8VCB1 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ndc1Q8VCB1 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ndc1Q8VCB1 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ndc1Q8VCB1 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ndc1Q8VCB1 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ndc1Q8VCB1 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ndc1Q8VCB1 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ndc1Q8VCB1 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ndc1Q8VCB1 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC14.66□□□□□ -0.06
Ndc1Q8VCB1 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ndc1Q8VCB1 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ndc1Q8VCB1 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ndc1Q8VCB1 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
Ndc1Q8VCB1 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ndc1Q8VCB1 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Ndc1Q8VCB1 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Ndc1Q8VCB1 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Ndc1Q8VCB1 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC14.66□□□□□ -0.06
Ndc1Q8VCB1 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Ndc1Q8VCB1 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ndc1Q8VCB1 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ndc1Q8VCB1 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC14.66□□□□□ -0.06
Ndc1Q8VCB1 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC14.66□□□□□ -0.06
Ndc1Q8VCB1 Gm43332-201ENSMUST00000202511 1044 ntBASIC14.66□□□□□ -0.06
Ndc1Q8VCB1 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ndc1Q8VCB1 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC14.66□□□□□ -0.06
Ndc1Q8VCB1 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ndc1Q8VCB1 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ndc1Q8VCB1 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ndc1Q8VCB1 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ndc1Q8VCB1 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ndc1Q8VCB1 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ndc1Q8VCB1 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ndc1Q8VCB1 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Ndc1Q8VCB1 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Ndc1Q8VCB1 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC14.66□□□□□ -0.06
Ndc1Q8VCB1 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms