Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Lsm1Q8VC85 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Lsm1Q8VC85 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Lsm1Q8VC85 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Lsm1Q8VC85 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Lsm1Q8VC85 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Lsm1Q8VC85 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Lsm1Q8VC85 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Lsm1Q8VC85 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Lsm1Q8VC85 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Lsm1Q8VC85 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC14.94□□□□□ -0.02
Lsm1Q8VC85 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Lsm1Q8VC85 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC14.94□□□□□ -0.02
Lsm1Q8VC85 Mir3081-201ENSMUST00000175305 84 ntBASIC14.94□□□□□ -0.02
Lsm1Q8VC85 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Lsm1Q8VC85 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC14.94□□□□□ -0.02
Lsm1Q8VC85 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Lsm1Q8VC85 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Lsm1Q8VC85 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Lsm1Q8VC85 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Lsm1Q8VC85 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Lsm1Q8VC85 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Lsm1Q8VC85 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Lsm1Q8VC85 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Lsm1Q8VC85 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Lsm1Q8VC85 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC14.93□□□□□ -0.02
Lsm1Q8VC85 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Lsm1Q8VC85 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Lsm1Q8VC85 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Lsm1Q8VC85 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Lsm1Q8VC85 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC14.93□□□□□ -0.02
Lsm1Q8VC85 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Lsm1Q8VC85 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Lsm1Q8VC85 Olfr129-201ENSMUST00000122318 993 ntBASIC14.93□□□□□ -0.02
Lsm1Q8VC85 Rprl3-201ENSMUST00000157400 290 ntBASIC14.93□□□□□ -0.02
Lsm1Q8VC85 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC14.93□□□□□ -0.02
Lsm1Q8VC85 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Lsm1Q8VC85 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Lsm1Q8VC85 AC127349.1-201ENSMUST00000224590 266 ntBASIC14.93□□□□□ -0.02
Lsm1Q8VC85 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Lsm1Q8VC85 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Lsm1Q8VC85 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Lsm1Q8VC85 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC14.93□□□□□ -0.02
Lsm1Q8VC85 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Lsm1Q8VC85 Gm13337-201ENSMUST00000119183 1594 ntBASIC14.93□□□□□ -0.02
Lsm1Q8VC85 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Lsm1Q8VC85 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Lsm1Q8VC85 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Lsm1Q8VC85 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Lsm1Q8VC85 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Lsm1Q8VC85 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Lsm1Q8VC85 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Lsm1Q8VC85 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Lsm1Q8VC85 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Lsm1Q8VC85 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Lsm1Q8VC85 Gm4609-201ENSMUST00000106443 1002 ntBASIC14.92□□□□□ -0.02
Lsm1Q8VC85 Gm5138-201ENSMUST00000113842 1002 ntBASIC14.92□□□□□ -0.02
Lsm1Q8VC85 Gm15191-201ENSMUST00000117933 1000 ntBASIC14.92□□□□□ -0.02
Lsm1Q8VC85 Gm12182-201ENSMUST00000118655 1008 ntBASIC14.92□□□□□ -0.02
Lsm1Q8VC85 Gm13882-201ENSMUST00000120886 1002 ntBASIC14.92□□□□□ -0.02
Lsm1Q8VC85 Gm10284-201ENSMUST00000145057 1005 ntBASIC14.92□□□□□ -0.02
Lsm1Q8VC85 Gm10481-201ENSMUST00000179228 1002 ntBASIC14.92□□□□□ -0.02
Lsm1Q8VC85 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC14.92□□□□□ -0.02
Lsm1Q8VC85 Gm2574-201ENSMUST00000181051 1002 ntBASIC14.92□□□□□ -0.02
Lsm1Q8VC85 Gm3200-201ENSMUST00000181493 1002 ntBASIC14.92□□□□□ -0.02
Lsm1Q8VC85 Gm8825-201ENSMUST00000182565 998 ntBASIC14.92□□□□□ -0.02
Lsm1Q8VC85 Gm4518-201ENSMUST00000182638 718 ntBASIC14.92□□□□□ -0.02
Lsm1Q8VC85 Gm8330-201ENSMUST00000182754 1008 ntBASIC14.92□□□□□ -0.02
Lsm1Q8VC85 Gm4575-201ENSMUST00000182991 1002 ntBASIC14.92□□□□□ -0.02
Lsm1Q8VC85 Gm8709-201ENSMUST00000183230 1012 ntBASIC14.92□□□□□ -0.02
Lsm1Q8VC85 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Lsm1Q8VC85 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC14.92□□□□□ -0.02
Lsm1Q8VC85 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Lsm1Q8VC85 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Lsm1Q8VC85 Gm10293-201ENSMUST00000076317 1002 ntBASIC14.92□□□□□ -0.02
Lsm1Q8VC85 Gm6316-201ENSMUST00000082064 1020 ntBASIC14.92□□□□□ -0.02
Lsm1Q8VC85 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Lsm1Q8VC85 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Lsm1Q8VC85 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Lsm1Q8VC85 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Lsm1Q8VC85 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Lsm1Q8VC85 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC14.92□□□□□ -0.02
Lsm1Q8VC85 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Lsm1Q8VC85 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC14.92□□□□□ -0.02
Lsm1Q8VC85 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Lsm1Q8VC85 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Lsm1Q8VC85 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Lsm1Q8VC85 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Lsm1Q8VC85 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC14.92□□□□□ -0.02
Lsm1Q8VC85 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Lsm1Q8VC85 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Lsm1Q8VC85 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Lsm1Q8VC85 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC14.91□□□□□ -0.02
Lsm1Q8VC85 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
Lsm1Q8VC85 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Lsm1Q8VC85 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Lsm1Q8VC85 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Lsm1Q8VC85 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Lsm1Q8VC85 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Lsm1Q8VC85 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 53.6 ms