Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC18.78■□□□□ 0.6
Ccdc9Q8VC31 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC18.78■□□□□ 0.6
Ccdc9Q8VC31 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ccdc9Q8VC31 Gm38577-201ENSMUST00000221531 4545 ntBASIC18.78■□□□□ 0.6
Ccdc9Q8VC31 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
Ccdc9Q8VC31 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ccdc9Q8VC31 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ccdc9Q8VC31 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC18.78■□□□□ 0.6
Ccdc9Q8VC31 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ccdc9Q8VC31 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Ccdc9Q8VC31 CT010444.2-201ENSMUST00000217877 1629 ntBASIC18.78■□□□□ 0.6
Ccdc9Q8VC31 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Ccdc9Q8VC31 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ccdc9Q8VC31 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ccdc9Q8VC31 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ccdc9Q8VC31 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ccdc9Q8VC31 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ccdc9Q8VC31 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ccdc9Q8VC31 Gm12441-201ENSMUST00000121806 588 ntBASIC18.77■□□□□ 0.6
Ccdc9Q8VC31 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
Ccdc9Q8VC31 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC18.77■□□□□ 0.6
Ccdc9Q8VC31 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC18.77■□□□□ 0.6
Ccdc9Q8VC31 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ccdc9Q8VC31 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ccdc9Q8VC31 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Ccdc9Q8VC31 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ccdc9Q8VC31 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Ccdc9Q8VC31 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
Ccdc9Q8VC31 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Ccdc9Q8VC31 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Ccdc9Q8VC31 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Ccdc9Q8VC31 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ccdc9Q8VC31 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ccdc9Q8VC31 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Ccdc9Q8VC31 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Ccdc9Q8VC31 Gm38391-201ENSMUST00000191720 4069 ntBASIC18.76■□□□□ 0.59
Ccdc9Q8VC31 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ccdc9Q8VC31 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ccdc9Q8VC31 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ccdc9Q8VC31 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ccdc9Q8VC31 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC18.76■□□□□ 0.59
Ccdc9Q8VC31 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ccdc9Q8VC31 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ccdc9Q8VC31 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC18.76■□□□□ 0.59
Ccdc9Q8VC31 Gm15847-201ENSMUST00000121417 1065 ntBASIC18.76■□□□□ 0.59
Ccdc9Q8VC31 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ccdc9Q8VC31 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ccdc9Q8VC31 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Ccdc9Q8VC31 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ccdc9Q8VC31 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ccdc9Q8VC31 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ccdc9Q8VC31 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ccdc9Q8VC31 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ccdc9Q8VC31 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ccdc9Q8VC31 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ccdc9Q8VC31 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ccdc9Q8VC31 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ccdc9Q8VC31 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Ccdc9Q8VC31 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Ccdc9Q8VC31 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC18.75■□□□□ 0.59
Ccdc9Q8VC31 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ccdc9Q8VC31 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Ccdc9Q8VC31 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ccdc9Q8VC31 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ccdc9Q8VC31 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC18.75■□□□□ 0.59
Ccdc9Q8VC31 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC18.75■□□□□ 0.59
Ccdc9Q8VC31 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ccdc9Q8VC31 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ccdc9Q8VC31 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ccdc9Q8VC31 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ccdc9Q8VC31 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ccdc9Q8VC31 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ccdc9Q8VC31 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ccdc9Q8VC31 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Ccdc9Q8VC31 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ccdc9Q8VC31 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ccdc9Q8VC31 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Ccdc9Q8VC31 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ccdc9Q8VC31 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ccdc9Q8VC31 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ccdc9Q8VC31 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ccdc9Q8VC31 Dio3-201ENSMUST00000097228 1449 ntBASIC18.74■□□□□ 0.59
Ccdc9Q8VC31 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Ccdc9Q8VC31 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ccdc9Q8VC31 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Ccdc9Q8VC31 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Ccdc9Q8VC31 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ccdc9Q8VC31 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC18.74■□□□□ 0.59
Ccdc9Q8VC31 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ccdc9Q8VC31 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ccdc9Q8VC31 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC18.74■□□□□ 0.59
Ccdc9Q8VC31 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ccdc9Q8VC31 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC18.74■□□□□ 0.59
Ccdc9Q8VC31 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Ccdc9Q8VC31 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC18.74■□□□□ 0.59
Ccdc9Q8VC31 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC18.74■□□□□ 0.59
Ccdc9Q8VC31 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC18.74■□□□□ 0.59
Ccdc9Q8VC31 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC18.74■□□□□ 0.59
Ccdc9Q8VC31 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC18.74■□□□□ 0.59
Ccdc9Q8VC31 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms