Protein–RNA interactions for Protein: Q8R4E9

Cdt1, DNA replication factor Cdt1, mousemouse

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdt1Q8R4E9 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC15.08■□□□□ 0
Cdt1Q8R4E9 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Cdt1Q8R4E9 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cdt1Q8R4E9 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cdt1Q8R4E9 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cdt1Q8R4E9 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Cdt1Q8R4E9 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Cdt1Q8R4E9 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC15.07■□□□□ 0
Cdt1Q8R4E9 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cdt1Q8R4E9 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC15.07■□□□□ 0
Cdt1Q8R4E9 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cdt1Q8R4E9 AC132265.1-201ENSMUST00000219233 1665 ntBASIC15.07■□□□□ 0
Cdt1Q8R4E9 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC15.07■□□□□ 0
Cdt1Q8R4E9 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Cdt1Q8R4E9 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC15.07■□□□□ 0
Cdt1Q8R4E9 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC15.07■□□□□ 0
Cdt1Q8R4E9 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cdt1Q8R4E9 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cdt1Q8R4E9 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC15.07■□□□□ 0
Cdt1Q8R4E9 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC15.07■□□□□ 0
Cdt1Q8R4E9 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Cdt1Q8R4E9 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Cdt1Q8R4E9 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Cdt1Q8R4E9 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cdt1Q8R4E9 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cdt1Q8R4E9 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cdt1Q8R4E9 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cdt1Q8R4E9 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC15.07■□□□□ 0
Cdt1Q8R4E9 Ccdc166-201ENSMUST00000182172 2584 ntBASIC15.07■□□□□ 0
Cdt1Q8R4E9 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cdt1Q8R4E9 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC15.07■□□□□ 0
Cdt1Q8R4E9 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cdt1Q8R4E9 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Cdt1Q8R4E9 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cdt1Q8R4E9 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC15.07■□□□□ 0
Cdt1Q8R4E9 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC15.06■□□□□ 0
Cdt1Q8R4E9 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC15.06■□□□□ 0
Cdt1Q8R4E9 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cdt1Q8R4E9 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cdt1Q8R4E9 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Cdt1Q8R4E9 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC15.06■□□□□ 0
Cdt1Q8R4E9 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Cdt1Q8R4E9 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cdt1Q8R4E9 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC15.06■□□□□ 0
Cdt1Q8R4E9 Gm15173-201ENSMUST00000122049 433 ntBASIC15.06■□□□□ 0
Cdt1Q8R4E9 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC15.06■□□□□ 0
Cdt1Q8R4E9 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC15.06■□□□□ 0
Cdt1Q8R4E9 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cdt1Q8R4E9 Gm24513-201ENSMUST00000174964 138 ntBASIC15.06■□□□□ 0
Cdt1Q8R4E9 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
Cdt1Q8R4E9 Gm27397-201ENSMUST00000184997 107 ntBASIC15.06■□□□□ 0
Cdt1Q8R4E9 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC15.06■□□□□ 0
Cdt1Q8R4E9 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC15.06■□□□□ 0
Cdt1Q8R4E9 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC15.06■□□□□ 0
Cdt1Q8R4E9 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC15.06■□□□□ 0
Cdt1Q8R4E9 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cdt1Q8R4E9 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cdt1Q8R4E9 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC15.06■□□□□ 0
Cdt1Q8R4E9 AC131586.3-201ENSMUST00000228355 1367 ntBASIC15.06■□□□□ 0
Cdt1Q8R4E9 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cdt1Q8R4E9 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cdt1Q8R4E9 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC15.06■□□□□ 0
Cdt1Q8R4E9 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC15.06■□□□□ 0
Cdt1Q8R4E9 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC15.06■□□□□ 0
Cdt1Q8R4E9 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Cdt1Q8R4E9 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Cdt1Q8R4E9 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Cdt1Q8R4E9 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cdt1Q8R4E9 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC15.06■□□□□ 0
Cdt1Q8R4E9 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cdt1Q8R4E9 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC15.06■□□□□ 0
Cdt1Q8R4E9 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC15.06■□□□□ 0
Cdt1Q8R4E9 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Cdt1Q8R4E9 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Cdt1Q8R4E9 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC15.06■□□□□ 0
Cdt1Q8R4E9 Gm42901-201ENSMUST00000197735 3171 ntBASIC15.06■□□□□ 0
Cdt1Q8R4E9 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Cdt1Q8R4E9 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Cdt1Q8R4E9 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC15.05■□□□□ 0
Cdt1Q8R4E9 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Cdt1Q8R4E9 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Cdt1Q8R4E9 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Cdt1Q8R4E9 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Cdt1Q8R4E9 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Cdt1Q8R4E9 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC15.05■□□□□ 0
Cdt1Q8R4E9 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC15.05■□□□□ 0
Cdt1Q8R4E9 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
Cdt1Q8R4E9 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Cdt1Q8R4E9 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC15.05■□□□□ 0
Cdt1Q8R4E9 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC15.05■□□□□ -0
Cdt1Q8R4E9 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Cdt1Q8R4E9 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC15.05■□□□□ -0
Cdt1Q8R4E9 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC15.05■□□□□ -0
Cdt1Q8R4E9 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC15.05■□□□□ -0
Cdt1Q8R4E9 Gm15590-201ENSMUST00000078419 552 ntBASIC15.05■□□□□ -0
Cdt1Q8R4E9 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC15.05■□□□□ -0
Cdt1Q8R4E9 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC15.05■□□□□ -0
Cdt1Q8R4E9 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC15.05■□□□□ -0
Cdt1Q8R4E9 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Cdt1Q8R4E9 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms