Protein–RNA interactions for Protein: Q8R323

Rfc3, Replication factor C subunit 3, mousemouse

Known RBP Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc3Q8R323 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rfc3Q8R323 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rfc3Q8R323 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rfc3Q8R323 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Rfc3Q8R323 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rfc3Q8R323 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rfc3Q8R323 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rfc3Q8R323 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Rfc3Q8R323 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rfc3Q8R323 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC14.37□□□□□ -0.11
Rfc3Q8R323 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rfc3Q8R323 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Rfc3Q8R323 Gm12350-201ENSMUST00000121208 462 ntBASIC14.37□□□□□ -0.11
Rfc3Q8R323 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC14.37□□□□□ -0.11
Rfc3Q8R323 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Rfc3Q8R323 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rfc3Q8R323 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Rfc3Q8R323 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC14.37□□□□□ -0.11
Rfc3Q8R323 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rfc3Q8R323 Gm9172-201ENSMUST00000212092 954 ntBASIC14.37□□□□□ -0.11
Rfc3Q8R323 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Rfc3Q8R323 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Rfc3Q8R323 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC14.37□□□□□ -0.11
Rfc3Q8R323 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Rfc3Q8R323 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC14.37□□□□□ -0.11
Rfc3Q8R323 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rfc3Q8R323 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rfc3Q8R323 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Rfc3Q8R323 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rfc3Q8R323 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rfc3Q8R323 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rfc3Q8R323 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rfc3Q8R323 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rfc3Q8R323 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rfc3Q8R323 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Rfc3Q8R323 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Rfc3Q8R323 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rfc3Q8R323 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rfc3Q8R323 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rfc3Q8R323 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC14.36□□□□□ -0.11
Rfc3Q8R323 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rfc3Q8R323 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC14.36□□□□□ -0.11
Rfc3Q8R323 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Rfc3Q8R323 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rfc3Q8R323 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rfc3Q8R323 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rfc3Q8R323 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
Rfc3Q8R323 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC14.36□□□□□ -0.11
Rfc3Q8R323 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC14.36□□□□□ -0.11
Rfc3Q8R323 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Rfc3Q8R323 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Rfc3Q8R323 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC14.36□□□□□ -0.11
Rfc3Q8R323 Gm8655-201ENSMUST00000221159 852 ntBASIC14.36□□□□□ -0.11
Rfc3Q8R323 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rfc3Q8R323 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rfc3Q8R323 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Rfc3Q8R323 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rfc3Q8R323 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rfc3Q8R323 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
Rfc3Q8R323 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rfc3Q8R323 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rfc3Q8R323 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rfc3Q8R323 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rfc3Q8R323 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
Rfc3Q8R323 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rfc3Q8R323 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rfc3Q8R323 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Rfc3Q8R323 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rfc3Q8R323 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
Rfc3Q8R323 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rfc3Q8R323 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rfc3Q8R323 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Rfc3Q8R323 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC14.35□□□□□ -0.11
Rfc3Q8R323 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rfc3Q8R323 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rfc3Q8R323 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC14.35□□□□□ -0.11
Rfc3Q8R323 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC14.35□□□□□ -0.11
Rfc3Q8R323 Gm1401-201ENSMUST00000122048 772 ntBASIC14.35□□□□□ -0.11
Rfc3Q8R323 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rfc3Q8R323 Gm7230-201ENSMUST00000173026 815 ntBASIC14.35□□□□□ -0.11
Rfc3Q8R323 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC14.35□□□□□ -0.11
Rfc3Q8R323 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC14.35□□□□□ -0.11
Rfc3Q8R323 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC14.35□□□□□ -0.11
Rfc3Q8R323 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rfc3Q8R323 Gm15590-201ENSMUST00000078419 552 ntBASIC14.35□□□□□ -0.11
Rfc3Q8R323 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Rfc3Q8R323 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rfc3Q8R323 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rfc3Q8R323 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rfc3Q8R323 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rfc3Q8R323 AC154412.1-201ENSMUST00000226540 2786 ntBASIC14.35□□□□□ -0.11
Rfc3Q8R323 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rfc3Q8R323 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Rfc3Q8R323 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rfc3Q8R323 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rfc3Q8R323 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Rfc3Q8R323 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rfc3Q8R323 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rfc3Q8R323 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rfc3Q8R323 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms