Protein–RNA interactions for Protein: Q8R1F9

Rpp40, Ribonuclease P protein subunit p40, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp40Q8R1F9 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rpp40Q8R1F9 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Rpp40Q8R1F9 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rpp40Q8R1F9 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rpp40Q8R1F9 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rpp40Q8R1F9 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC16.64■□□□□ 0.25
Rpp40Q8R1F9 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rpp40Q8R1F9 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rpp40Q8R1F9 AC122901.1-201ENSMUST00000214203 1790 ntBASIC16.64■□□□□ 0.25
Rpp40Q8R1F9 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC16.64■□□□□ 0.25
Rpp40Q8R1F9 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rpp40Q8R1F9 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rpp40Q8R1F9 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Rpp40Q8R1F9 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Rpp40Q8R1F9 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rpp40Q8R1F9 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rpp40Q8R1F9 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Rpp40Q8R1F9 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
Rpp40Q8R1F9 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rpp40Q8R1F9 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Rpp40Q8R1F9 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC16.63■□□□□ 0.25
Rpp40Q8R1F9 Gm8318-201ENSMUST00000182954 872 ntBASIC16.63■□□□□ 0.25
Rpp40Q8R1F9 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rpp40Q8R1F9 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rpp40Q8R1F9 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Rpp40Q8R1F9 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rpp40Q8R1F9 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rpp40Q8R1F9 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rpp40Q8R1F9 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.25
Rpp40Q8R1F9 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Rpp40Q8R1F9 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Rpp40Q8R1F9 Ccdc166-201ENSMUST00000182172 2584 ntBASIC16.63■□□□□ 0.25
Rpp40Q8R1F9 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Rpp40Q8R1F9 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Rpp40Q8R1F9 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rpp40Q8R1F9 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Rpp40Q8R1F9 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rpp40Q8R1F9 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rpp40Q8R1F9 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rpp40Q8R1F9 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Rpp40Q8R1F9 Gm14140-201ENSMUST00000119999 995 ntBASIC16.62■□□□□ 0.25
Rpp40Q8R1F9 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Rpp40Q8R1F9 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC16.62■□□□□ 0.25
Rpp40Q8R1F9 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC16.62■□□□□ 0.25
Rpp40Q8R1F9 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC16.62■□□□□ 0.25
Rpp40Q8R1F9 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rpp40Q8R1F9 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rpp40Q8R1F9 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Rpp40Q8R1F9 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rpp40Q8R1F9 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Rpp40Q8R1F9 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Rpp40Q8R1F9 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Rpp40Q8R1F9 Dancr-204ENSMUST00000132389 2347 ntBASIC16.62■□□□□ 0.25
Rpp40Q8R1F9 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Rpp40Q8R1F9 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rpp40Q8R1F9 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC16.62■□□□□ 0.25
Rpp40Q8R1F9 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Rpp40Q8R1F9 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rpp40Q8R1F9 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rpp40Q8R1F9 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rpp40Q8R1F9 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Rpp40Q8R1F9 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Rpp40Q8R1F9 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rpp40Q8R1F9 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Rpp40Q8R1F9 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rpp40Q8R1F9 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rpp40Q8R1F9 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Rpp40Q8R1F9 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Rpp40Q8R1F9 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rpp40Q8R1F9 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rpp40Q8R1F9 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rpp40Q8R1F9 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Rpp40Q8R1F9 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Rpp40Q8R1F9 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC16.61■□□□□ 0.25
Rpp40Q8R1F9 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rpp40Q8R1F9 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rpp40Q8R1F9 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rpp40Q8R1F9 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rpp40Q8R1F9 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rpp40Q8R1F9 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rpp40Q8R1F9 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Rpp40Q8R1F9 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rpp40Q8R1F9 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rpp40Q8R1F9 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rpp40Q8R1F9 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rpp40Q8R1F9 Best4-ps-201ENSMUST00000129783 1380 ntBASIC16.61■□□□□ 0.25
Rpp40Q8R1F9 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rpp40Q8R1F9 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rpp40Q8R1F9 AC163637.1-201ENSMUST00000215491 1894 ntBASIC16.61■□□□□ 0.25
Rpp40Q8R1F9 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rpp40Q8R1F9 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rpp40Q8R1F9 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rpp40Q8R1F9 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC16.6■□□□□ 0.25
Rpp40Q8R1F9 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Rpp40Q8R1F9 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rpp40Q8R1F9 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rpp40Q8R1F9 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rpp40Q8R1F9 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rpp40Q8R1F9 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rpp40Q8R1F9 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC16.6■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms