Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Sf3a1Q8K4Z5 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC19.04■□□□□ 0.64
Sf3a1Q8K4Z5 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC19.04■□□□□ 0.64
Sf3a1Q8K4Z5 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Sf3a1Q8K4Z5 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Sf3a1Q8K4Z5 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Sf3a1Q8K4Z5 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Sf3a1Q8K4Z5 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC19.04■□□□□ 0.64
Sf3a1Q8K4Z5 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Sf3a1Q8K4Z5 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Sf3a1Q8K4Z5 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Sf3a1Q8K4Z5 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Sf3a1Q8K4Z5 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Sf3a1Q8K4Z5 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Sf3a1Q8K4Z5 AC093043.3-201ENSMUST00000226531 2273 ntBASIC19.03■□□□□ 0.64
Sf3a1Q8K4Z5 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Sf3a1Q8K4Z5 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Sf3a1Q8K4Z5 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Sf3a1Q8K4Z5 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Sf3a1Q8K4Z5 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC19.03■□□□□ 0.64
Sf3a1Q8K4Z5 AC093926.2-201ENSMUST00000214468 1228 ntBASIC19.03■□□□□ 0.64
Sf3a1Q8K4Z5 Gm7461-201ENSMUST00000058918 827 ntBASIC19.03■□□□□ 0.64
Sf3a1Q8K4Z5 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Sf3a1Q8K4Z5 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Sf3a1Q8K4Z5 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Sf3a1Q8K4Z5 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Sf3a1Q8K4Z5 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC19.03■□□□□ 0.64
Sf3a1Q8K4Z5 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC19.03■□□□□ 0.64
Sf3a1Q8K4Z5 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Sf3a1Q8K4Z5 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Sf3a1Q8K4Z5 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Sf3a1Q8K4Z5 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Sf3a1Q8K4Z5 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Sf3a1Q8K4Z5 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Sf3a1Q8K4Z5 Prkcz2-201ENSMUST00000206136 1756 ntBASIC19.02■□□□□ 0.64
Sf3a1Q8K4Z5 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Sf3a1Q8K4Z5 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC19.02■□□□□ 0.64
Sf3a1Q8K4Z5 Gm15358-201ENSMUST00000119249 520 ntBASIC19.02■□□□□ 0.64
Sf3a1Q8K4Z5 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
Sf3a1Q8K4Z5 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Sf3a1Q8K4Z5 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Sf3a1Q8K4Z5 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Sf3a1Q8K4Z5 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC19.02■□□□□ 0.64
Sf3a1Q8K4Z5 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC19.02■□□□□ 0.63
Sf3a1Q8K4Z5 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
Sf3a1Q8K4Z5 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Sf3a1Q8K4Z5 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Sf3a1Q8K4Z5 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Sf3a1Q8K4Z5 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Sf3a1Q8K4Z5 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Sf3a1Q8K4Z5 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Sf3a1Q8K4Z5 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC19.01■□□□□ 0.63
Sf3a1Q8K4Z5 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC19.01■□□□□ 0.63
Sf3a1Q8K4Z5 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Sf3a1Q8K4Z5 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Sf3a1Q8K4Z5 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Sf3a1Q8K4Z5 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Sf3a1Q8K4Z5 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC19.01■□□□□ 0.63
Sf3a1Q8K4Z5 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Sf3a1Q8K4Z5 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Sf3a1Q8K4Z5 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Sf3a1Q8K4Z5 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Sf3a1Q8K4Z5 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Sf3a1Q8K4Z5 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Sf3a1Q8K4Z5 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Sf3a1Q8K4Z5 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Sf3a1Q8K4Z5 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Sf3a1Q8K4Z5 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Sf3a1Q8K4Z5 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Sf3a1Q8K4Z5 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Sf3a1Q8K4Z5 Gm7230-201ENSMUST00000173026 815 ntBASIC19■□□□□ 0.63
Sf3a1Q8K4Z5 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Sf3a1Q8K4Z5 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC19■□□□□ 0.63
Sf3a1Q8K4Z5 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Sf3a1Q8K4Z5 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC19■□□□□ 0.63
Sf3a1Q8K4Z5 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Sf3a1Q8K4Z5 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Sf3a1Q8K4Z5 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Sf3a1Q8K4Z5 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC19■□□□□ 0.63
Sf3a1Q8K4Z5 Gm3928-201ENSMUST00000121141 1307 ntBASIC19■□□□□ 0.63
Sf3a1Q8K4Z5 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Sf3a1Q8K4Z5 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Sf3a1Q8K4Z5 App-207ENSMUST00000227737 2827 ntBASIC18.99■□□□□ 0.63
Sf3a1Q8K4Z5 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Sf3a1Q8K4Z5 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Sf3a1Q8K4Z5 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Sf3a1Q8K4Z5 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC18.99■□□□□ 0.63
Sf3a1Q8K4Z5 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Sf3a1Q8K4Z5 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Sf3a1Q8K4Z5 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Sf3a1Q8K4Z5 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC18.99■□□□□ 0.63
Sf3a1Q8K4Z5 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC18.99■□□□□ 0.63
Sf3a1Q8K4Z5 Gm10060-201ENSMUST00000212002 111 ntBASIC18.99■□□□□ 0.63
Sf3a1Q8K4Z5 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
Sf3a1Q8K4Z5 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Sf3a1Q8K4Z5 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Sf3a1Q8K4Z5 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Sf3a1Q8K4Z5 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC18.99■□□□□ 0.63
Sf3a1Q8K4Z5 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Sf3a1Q8K4Z5 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms