Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ddx54Q8K4L0 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ddx54Q8K4L0 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ddx54Q8K4L0 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ddx54Q8K4L0 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
Ddx54Q8K4L0 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC20.28■□□□□ 0.84
Ddx54Q8K4L0 Gm13015-201ENSMUST00000118674 204 ntBASIC20.28■□□□□ 0.84
Ddx54Q8K4L0 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Ddx54Q8K4L0 Gm23984-201ENSMUST00000157139 203 ntBASIC20.28■□□□□ 0.84
Ddx54Q8K4L0 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Ddx54Q8K4L0 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Ddx54Q8K4L0 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC20.28■□□□□ 0.84
Ddx54Q8K4L0 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC20.28■□□□□ 0.84
Ddx54Q8K4L0 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC20.28■□□□□ 0.84
Ddx54Q8K4L0 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ddx54Q8K4L0 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ddx54Q8K4L0 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Ddx54Q8K4L0 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ddx54Q8K4L0 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
Ddx54Q8K4L0 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Ddx54Q8K4L0 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ddx54Q8K4L0 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ddx54Q8K4L0 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ddx54Q8K4L0 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Ddx54Q8K4L0 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ddx54Q8K4L0 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Ddx54Q8K4L0 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Ddx54Q8K4L0 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Ddx54Q8K4L0 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ddx54Q8K4L0 Gm15653-201ENSMUST00000119247 907 ntBASIC20.27■□□□□ 0.84
Ddx54Q8K4L0 Gm45384-201ENSMUST00000210451 277 ntBASIC20.27■□□□□ 0.84
Ddx54Q8K4L0 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ddx54Q8K4L0 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Ddx54Q8K4L0 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ddx54Q8K4L0 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.83
Ddx54Q8K4L0 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC20.27■□□□□ 0.83
Ddx54Q8K4L0 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.83
Ddx54Q8K4L0 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Ddx54Q8K4L0 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ddx54Q8K4L0 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Ddx54Q8K4L0 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Ddx54Q8K4L0 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ddx54Q8K4L0 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ddx54Q8K4L0 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ddx54Q8K4L0 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ddx54Q8K4L0 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Ddx54Q8K4L0 Mir7085-201ENSMUST00000184353 66 ntBASIC20.26■□□□□ 0.83
Ddx54Q8K4L0 Gm28631-201ENSMUST00000190740 334 ntBASIC20.26■□□□□ 0.83
Ddx54Q8K4L0 Gm18049-201ENSMUST00000208909 581 ntBASIC20.26■□□□□ 0.83
Ddx54Q8K4L0 Gm7775-201ENSMUST00000218871 853 ntBASIC20.26■□□□□ 0.83
Ddx54Q8K4L0 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ddx54Q8K4L0 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Ddx54Q8K4L0 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ddx54Q8K4L0 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC20.26■□□□□ 0.83
Ddx54Q8K4L0 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ddx54Q8K4L0 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC20.26■□□□□ 0.83
Ddx54Q8K4L0 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ddx54Q8K4L0 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Ddx54Q8K4L0 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ddx54Q8K4L0 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ddx54Q8K4L0 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Ddx54Q8K4L0 Gm11478-201ENSMUST00000117851 599 ntBASIC20.25■□□□□ 0.83
Ddx54Q8K4L0 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC20.25■□□□□ 0.83
Ddx54Q8K4L0 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC20.25■□□□□ 0.83
Ddx54Q8K4L0 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ddx54Q8K4L0 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Ddx54Q8K4L0 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC20.25■□□□□ 0.83
Ddx54Q8K4L0 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Ddx54Q8K4L0 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ddx54Q8K4L0 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC20.25■□□□□ 0.83
Ddx54Q8K4L0 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ddx54Q8K4L0 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC20.25■□□□□ 0.83
Ddx54Q8K4L0 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Ddx54Q8K4L0 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ddx54Q8K4L0 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ddx54Q8K4L0 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ddx54Q8K4L0 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
Ddx54Q8K4L0 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC20.24■□□□□ 0.83
Ddx54Q8K4L0 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ddx54Q8K4L0 Haglr-201ENSMUST00000100000 2085 ntBASIC20.24■□□□□ 0.83
Ddx54Q8K4L0 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Ddx54Q8K4L0 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC20.24■□□□□ 0.83
Ddx54Q8K4L0 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ddx54Q8K4L0 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ddx54Q8K4L0 Gm36858-201ENSMUST00000194501 2391 ntBASIC20.24■□□□□ 0.83
Ddx54Q8K4L0 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
Ddx54Q8K4L0 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ddx54Q8K4L0 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ddx54Q8K4L0 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ddx54Q8K4L0 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ddx54Q8K4L0 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ddx54Q8K4L0 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ddx54Q8K4L0 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ddx54Q8K4L0 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ddx54Q8K4L0 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ddx54Q8K4L0 Gm6539-201ENSMUST00000119157 1064 ntBASIC20.23■□□□□ 0.83
Ddx54Q8K4L0 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Ddx54Q8K4L0 Gm12138-201ENSMUST00000122180 951 ntBASIC20.23■□□□□ 0.83
Ddx54Q8K4L0 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Ddx54Q8K4L0 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC20.23■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms