Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cchcr1Q8K2I2 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Cchcr1Q8K2I2 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cchcr1Q8K2I2 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cchcr1Q8K2I2 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC18.42■□□□□ 0.54
Cchcr1Q8K2I2 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC18.42■□□□□ 0.54
Cchcr1Q8K2I2 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cchcr1Q8K2I2 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Cchcr1Q8K2I2 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cchcr1Q8K2I2 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cchcr1Q8K2I2 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cchcr1Q8K2I2 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cchcr1Q8K2I2 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cchcr1Q8K2I2 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cchcr1Q8K2I2 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Cchcr1Q8K2I2 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cchcr1Q8K2I2 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC18.42■□□□□ 0.54
Cchcr1Q8K2I2 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cchcr1Q8K2I2 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cchcr1Q8K2I2 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Cchcr1Q8K2I2 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cchcr1Q8K2I2 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cchcr1Q8K2I2 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cchcr1Q8K2I2 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cchcr1Q8K2I2 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cchcr1Q8K2I2 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cchcr1Q8K2I2 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cchcr1Q8K2I2 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC18.41■□□□□ 0.54
Cchcr1Q8K2I2 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Cchcr1Q8K2I2 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cchcr1Q8K2I2 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cchcr1Q8K2I2 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Cchcr1Q8K2I2 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cchcr1Q8K2I2 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Cchcr1Q8K2I2 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC18.41■□□□□ 0.54
Cchcr1Q8K2I2 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cchcr1Q8K2I2 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC18.41■□□□□ 0.54
Cchcr1Q8K2I2 Vti1a-206ENSMUST00000225529 1244 ntBASIC18.41■□□□□ 0.54
Cchcr1Q8K2I2 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cchcr1Q8K2I2 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cchcr1Q8K2I2 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cchcr1Q8K2I2 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cchcr1Q8K2I2 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
Cchcr1Q8K2I2 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cchcr1Q8K2I2 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cchcr1Q8K2I2 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Cchcr1Q8K2I2 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cchcr1Q8K2I2 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cchcr1Q8K2I2 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cchcr1Q8K2I2 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC18.4■□□□□ 0.54
Cchcr1Q8K2I2 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cchcr1Q8K2I2 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cchcr1Q8K2I2 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC18.4■□□□□ 0.54
Cchcr1Q8K2I2 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC18.4■□□□□ 0.54
Cchcr1Q8K2I2 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cchcr1Q8K2I2 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cchcr1Q8K2I2 BC037039-201ENSMUST00000192003 2205 ntBASIC18.4■□□□□ 0.54
Cchcr1Q8K2I2 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC18.4■□□□□ 0.54
Cchcr1Q8K2I2 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cchcr1Q8K2I2 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Cchcr1Q8K2I2 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
Cchcr1Q8K2I2 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC18.4■□□□□ 0.54
Cchcr1Q8K2I2 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cchcr1Q8K2I2 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Cchcr1Q8K2I2 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Cchcr1Q8K2I2 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cchcr1Q8K2I2 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC18.4■□□□□ 0.54
Cchcr1Q8K2I2 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cchcr1Q8K2I2 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cchcr1Q8K2I2 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cchcr1Q8K2I2 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Cchcr1Q8K2I2 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Cchcr1Q8K2I2 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC18.39■□□□□ 0.54
Cchcr1Q8K2I2 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Cchcr1Q8K2I2 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
Cchcr1Q8K2I2 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Cchcr1Q8K2I2 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC18.39■□□□□ 0.53
Cchcr1Q8K2I2 Gm13337-201ENSMUST00000119183 1594 ntBASIC18.39■□□□□ 0.53
Cchcr1Q8K2I2 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
Cchcr1Q8K2I2 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cchcr1Q8K2I2 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Cchcr1Q8K2I2 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC18.39■□□□□ 0.53
Cchcr1Q8K2I2 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cchcr1Q8K2I2 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cchcr1Q8K2I2 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cchcr1Q8K2I2 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Cchcr1Q8K2I2 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC18.39■□□□□ 0.53
Cchcr1Q8K2I2 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC18.39■□□□□ 0.53
Cchcr1Q8K2I2 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC18.39■□□□□ 0.53
Cchcr1Q8K2I2 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC18.39■□□□□ 0.53
Cchcr1Q8K2I2 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC18.39■□□□□ 0.53
Cchcr1Q8K2I2 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cchcr1Q8K2I2 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cchcr1Q8K2I2 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cchcr1Q8K2I2 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cchcr1Q8K2I2 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cchcr1Q8K2I2 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cchcr1Q8K2I2 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cchcr1Q8K2I2 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cchcr1Q8K2I2 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms