Protein–RNA interactions for Protein: Q8CGW4

Sox30, Transcription factor SOX-30, mousemouse

Predictions only

Length 782 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox30Q8CGW4 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sox30Q8CGW4 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC17.01■□□□□ 0.31
Sox30Q8CGW4 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sox30Q8CGW4 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sox30Q8CGW4 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Sox30Q8CGW4 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sox30Q8CGW4 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Sox30Q8CGW4 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Sox30Q8CGW4 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
Sox30Q8CGW4 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Sox30Q8CGW4 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC17.01■□□□□ 0.31
Sox30Q8CGW4 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Sox30Q8CGW4 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Sox30Q8CGW4 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC17■□□□□ 0.31
Sox30Q8CGW4 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Sox30Q8CGW4 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC17■□□□□ 0.31
Sox30Q8CGW4 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Sox30Q8CGW4 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Sox30Q8CGW4 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Sox30Q8CGW4 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC17■□□□□ 0.31
Sox30Q8CGW4 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC17■□□□□ 0.31
Sox30Q8CGW4 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC17■□□□□ 0.31
Sox30Q8CGW4 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Sox30Q8CGW4 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Sox30Q8CGW4 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
Sox30Q8CGW4 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC17■□□□□ 0.31
Sox30Q8CGW4 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Sox30Q8CGW4 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC17■□□□□ 0.31
Sox30Q8CGW4 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC17■□□□□ 0.31
Sox30Q8CGW4 Gm8258-201ENSMUST00000055593 1449 ntBASIC17■□□□□ 0.31
Sox30Q8CGW4 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Sox30Q8CGW4 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Sox30Q8CGW4 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Sox30Q8CGW4 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC17■□□□□ 0.31
Sox30Q8CGW4 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Sox30Q8CGW4 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC17■□□□□ 0.31
Sox30Q8CGW4 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC17■□□□□ 0.31
Sox30Q8CGW4 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Sox30Q8CGW4 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Sox30Q8CGW4 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Sox30Q8CGW4 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Sox30Q8CGW4 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Sox30Q8CGW4 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Sox30Q8CGW4 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Sox30Q8CGW4 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sox30Q8CGW4 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Sox30Q8CGW4 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sox30Q8CGW4 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Sox30Q8CGW4 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Sox30Q8CGW4 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC16.99■□□□□ 0.31
Sox30Q8CGW4 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sox30Q8CGW4 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Sox30Q8CGW4 Mir3081-201ENSMUST00000175305 84 ntBASIC16.99■□□□□ 0.31
Sox30Q8CGW4 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC16.99■□□□□ 0.31
Sox30Q8CGW4 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sox30Q8CGW4 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sox30Q8CGW4 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Sox30Q8CGW4 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sox30Q8CGW4 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Sox30Q8CGW4 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sox30Q8CGW4 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sox30Q8CGW4 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC16.98■□□□□ 0.31
Sox30Q8CGW4 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sox30Q8CGW4 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Sox30Q8CGW4 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sox30Q8CGW4 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sox30Q8CGW4 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sox30Q8CGW4 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC16.98■□□□□ 0.31
Sox30Q8CGW4 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sox30Q8CGW4 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Sox30Q8CGW4 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC16.98■□□□□ 0.31
Sox30Q8CGW4 Rprl3-201ENSMUST00000157400 290 ntBASIC16.98■□□□□ 0.31
Sox30Q8CGW4 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sox30Q8CGW4 Gm7286-201ENSMUST00000182691 1007 ntBASIC16.98■□□□□ 0.31
Sox30Q8CGW4 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC16.98■□□□□ 0.31
Sox30Q8CGW4 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Sox30Q8CGW4 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sox30Q8CGW4 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sox30Q8CGW4 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sox30Q8CGW4 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sox30Q8CGW4 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Sox30Q8CGW4 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sox30Q8CGW4 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sox30Q8CGW4 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sox30Q8CGW4 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Sox30Q8CGW4 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sox30Q8CGW4 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sox30Q8CGW4 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sox30Q8CGW4 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sox30Q8CGW4 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Sox30Q8CGW4 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sox30Q8CGW4 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sox30Q8CGW4 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Sox30Q8CGW4 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sox30Q8CGW4 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sox30Q8CGW4 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Sox30Q8CGW4 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sox30Q8CGW4 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Sox30Q8CGW4 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC16.97■□□□□ 0.31
Sox30Q8CGW4 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms