Protein–RNA interactions for Protein: Q8CCS6

Pabpn1, Polyadenylate-binding protein 2, mousemouse

Known RBP Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pabpn1Q8CCS6 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC23.81■■□□□ 1.4
Pabpn1Q8CCS6 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC23.81■■□□□ 1.4
Pabpn1Q8CCS6 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC23.81■■□□□ 1.4
Pabpn1Q8CCS6 Gm27243-201ENSMUST00000183964 521 ntBASIC23.81■■□□□ 1.4
Pabpn1Q8CCS6 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC23.81■■□□□ 1.4
Pabpn1Q8CCS6 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Pabpn1Q8CCS6 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
Pabpn1Q8CCS6 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Pabpn1Q8CCS6 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
Pabpn1Q8CCS6 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Pabpn1Q8CCS6 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Pabpn1Q8CCS6 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC23.81■■□□□ 1.4
Pabpn1Q8CCS6 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
Pabpn1Q8CCS6 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Pabpn1Q8CCS6 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC23.8■■□□□ 1.4
Pabpn1Q8CCS6 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Pabpn1Q8CCS6 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC23.8■■□□□ 1.4
Pabpn1Q8CCS6 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC23.8■■□□□ 1.4
Pabpn1Q8CCS6 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC23.8■■□□□ 1.4
Pabpn1Q8CCS6 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Pabpn1Q8CCS6 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Pabpn1Q8CCS6 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Pabpn1Q8CCS6 AC165157.4-201ENSMUST00000220587 139 ntBASIC23.8■■□□□ 1.4
Pabpn1Q8CCS6 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Pabpn1Q8CCS6 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Pabpn1Q8CCS6 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
Pabpn1Q8CCS6 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC23.8■■□□□ 1.4
Pabpn1Q8CCS6 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Pabpn1Q8CCS6 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
Pabpn1Q8CCS6 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC23.79■■□□□ 1.4
Pabpn1Q8CCS6 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Pabpn1Q8CCS6 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Pabpn1Q8CCS6 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC23.79■■□□□ 1.4
Pabpn1Q8CCS6 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC23.79■■□□□ 1.4
Pabpn1Q8CCS6 Gm17794-201ENSMUST00000220252 955 ntBASIC23.79■■□□□ 1.4
Pabpn1Q8CCS6 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
Pabpn1Q8CCS6 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Pabpn1Q8CCS6 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
Pabpn1Q8CCS6 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Pabpn1Q8CCS6 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Pabpn1Q8CCS6 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
Pabpn1Q8CCS6 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Pabpn1Q8CCS6 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Pabpn1Q8CCS6 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Pabpn1Q8CCS6 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Pabpn1Q8CCS6 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Pabpn1Q8CCS6 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Pabpn1Q8CCS6 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Pabpn1Q8CCS6 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC23.78■■□□□ 1.4
Pabpn1Q8CCS6 Mir1894-201ENSMUST00000122802 81 ntBASIC23.78■■□□□ 1.4
Pabpn1Q8CCS6 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC23.78■■□□□ 1.4
Pabpn1Q8CCS6 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC23.78■■□□□ 1.4
Pabpn1Q8CCS6 Gm7067-201ENSMUST00000207698 1249 ntBASIC23.78■■□□□ 1.4
Pabpn1Q8CCS6 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Pabpn1Q8CCS6 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
Pabpn1Q8CCS6 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Pabpn1Q8CCS6 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Pabpn1Q8CCS6 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Pabpn1Q8CCS6 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Pabpn1Q8CCS6 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
Pabpn1Q8CCS6 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Pabpn1Q8CCS6 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Pabpn1Q8CCS6 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Pabpn1Q8CCS6 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Pabpn1Q8CCS6 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Pabpn1Q8CCS6 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC23.77■■□□□ 1.4
Pabpn1Q8CCS6 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC23.77■■□□□ 1.4
Pabpn1Q8CCS6 Gm38230-201ENSMUST00000193572 1159 ntBASIC23.77■■□□□ 1.4
Pabpn1Q8CCS6 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC23.77■■□□□ 1.4
Pabpn1Q8CCS6 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC23.77■■□□□ 1.4
Pabpn1Q8CCS6 CT010506.4-201ENSMUST00000225457 351 ntBASIC23.77■■□□□ 1.4
Pabpn1Q8CCS6 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC23.77■■□□□ 1.4
Pabpn1Q8CCS6 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Pabpn1Q8CCS6 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
Pabpn1Q8CCS6 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
Pabpn1Q8CCS6 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC23.77■■□□□ 1.4
Pabpn1Q8CCS6 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC23.76■■□□□ 1.39
Pabpn1Q8CCS6 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
Pabpn1Q8CCS6 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
Pabpn1Q8CCS6 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Pabpn1Q8CCS6 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC23.76■■□□□ 1.39
Pabpn1Q8CCS6 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC23.76■■□□□ 1.39
Pabpn1Q8CCS6 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC23.76■■□□□ 1.39
Pabpn1Q8CCS6 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
Pabpn1Q8CCS6 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC23.76■■□□□ 1.39
Pabpn1Q8CCS6 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Pabpn1Q8CCS6 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC23.76■■□□□ 1.39
Pabpn1Q8CCS6 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
Pabpn1Q8CCS6 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Pabpn1Q8CCS6 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC23.76■■□□□ 1.39
Pabpn1Q8CCS6 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
Pabpn1Q8CCS6 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Pabpn1Q8CCS6 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Pabpn1Q8CCS6 Mir692-1-201ENSMUST00000102263 109 ntBASIC23.75■■□□□ 1.39
Pabpn1Q8CCS6 Gm5940-201ENSMUST00000117582 1068 ntBASIC23.75■■□□□ 1.39
Pabpn1Q8CCS6 Gm14722-201ENSMUST00000118943 689 ntBASIC23.75■■□□□ 1.39
Pabpn1Q8CCS6 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Pabpn1Q8CCS6 AA619741-201ENSMUST00000195095 646 ntBASIC23.75■■□□□ 1.39
Pabpn1Q8CCS6 Gm7399-201ENSMUST00000032395 858 ntBASIC23.75■■□□□ 1.39
Pabpn1Q8CCS6 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms