Protein–RNA interactions for Protein: Q8C8C1

Rtp1, Receptor-transporting protein 1, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtp1Q8C8C1 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rtp1Q8C8C1 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rtp1Q8C8C1 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rtp1Q8C8C1 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Rtp1Q8C8C1 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Rtp1Q8C8C1 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Rtp1Q8C8C1 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rtp1Q8C8C1 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC17.69■□□□□ 0.42
Rtp1Q8C8C1 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rtp1Q8C8C1 Gm37166-201ENSMUST00000195473 2474 ntBASIC17.69■□□□□ 0.42
Rtp1Q8C8C1 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Rtp1Q8C8C1 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Rtp1Q8C8C1 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rtp1Q8C8C1 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rtp1Q8C8C1 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rtp1Q8C8C1 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rtp1Q8C8C1 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rtp1Q8C8C1 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rtp1Q8C8C1 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rtp1Q8C8C1 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rtp1Q8C8C1 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Rtp1Q8C8C1 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rtp1Q8C8C1 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rtp1Q8C8C1 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC17.68■□□□□ 0.42
Rtp1Q8C8C1 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Rtp1Q8C8C1 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rtp1Q8C8C1 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rtp1Q8C8C1 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Rtp1Q8C8C1 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rtp1Q8C8C1 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rtp1Q8C8C1 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Rtp1Q8C8C1 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rtp1Q8C8C1 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rtp1Q8C8C1 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rtp1Q8C8C1 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rtp1Q8C8C1 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rtp1Q8C8C1 Gm43072-201ENSMUST00000200283 1671 ntBASIC17.67■□□□□ 0.42
Rtp1Q8C8C1 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rtp1Q8C8C1 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rtp1Q8C8C1 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rtp1Q8C8C1 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rtp1Q8C8C1 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Rtp1Q8C8C1 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rtp1Q8C8C1 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC17.67■□□□□ 0.42
Rtp1Q8C8C1 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Rtp1Q8C8C1 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC17.67■□□□□ 0.42
Rtp1Q8C8C1 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Rtp1Q8C8C1 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Rtp1Q8C8C1 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rtp1Q8C8C1 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rtp1Q8C8C1 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rtp1Q8C8C1 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC17.67■□□□□ 0.42
Rtp1Q8C8C1 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rtp1Q8C8C1 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Rtp1Q8C8C1 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rtp1Q8C8C1 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rtp1Q8C8C1 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rtp1Q8C8C1 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Rtp1Q8C8C1 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Rtp1Q8C8C1 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rtp1Q8C8C1 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rtp1Q8C8C1 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC17.66■□□□□ 0.42
Rtp1Q8C8C1 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rtp1Q8C8C1 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Rtp1Q8C8C1 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC17.66■□□□□ 0.42
Rtp1Q8C8C1 Rbfox2-206ENSMUST00000227314 1810 ntBASIC17.66■□□□□ 0.42
Rtp1Q8C8C1 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rtp1Q8C8C1 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rtp1Q8C8C1 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC17.66■□□□□ 0.42
Rtp1Q8C8C1 Gm15693-201ENSMUST00000120470 637 ntBASIC17.66■□□□□ 0.42
Rtp1Q8C8C1 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC17.66■□□□□ 0.42
Rtp1Q8C8C1 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC17.66■□□□□ 0.42
Rtp1Q8C8C1 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC17.66■□□□□ 0.42
Rtp1Q8C8C1 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rtp1Q8C8C1 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rtp1Q8C8C1 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rtp1Q8C8C1 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rtp1Q8C8C1 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Rtp1Q8C8C1 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rtp1Q8C8C1 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC17.66■□□□□ 0.42
Rtp1Q8C8C1 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rtp1Q8C8C1 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Rtp1Q8C8C1 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC17.66■□□□□ 0.42
Rtp1Q8C8C1 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC17.66■□□□□ 0.42
Rtp1Q8C8C1 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rtp1Q8C8C1 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Rtp1Q8C8C1 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rtp1Q8C8C1 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Rtp1Q8C8C1 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rtp1Q8C8C1 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Rtp1Q8C8C1 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rtp1Q8C8C1 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rtp1Q8C8C1 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rtp1Q8C8C1 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC17.65■□□□□ 0.42
Rtp1Q8C8C1 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Rtp1Q8C8C1 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Rtp1Q8C8C1 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Rtp1Q8C8C1 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rtp1Q8C8C1 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Rtp1Q8C8C1 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms