Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Gm44367-201ENSMUST00000196836 138 ntBASIC17.17■□□□□ 0.34
Trim9Q8C7M3 Gm44350-201ENSMUST00000197197 138 ntBASIC17.17■□□□□ 0.34
Trim9Q8C7M3 Gm44390-201ENSMUST00000197533 144 ntBASIC17.17■□□□□ 0.34
Trim9Q8C7M3 Gm44313-201ENSMUST00000198018 138 ntBASIC17.17■□□□□ 0.34
Trim9Q8C7M3 Gm44486-201ENSMUST00000198508 138 ntBASIC17.17■□□□□ 0.34
Trim9Q8C7M3 Gm44314-201ENSMUST00000199263 138 ntBASIC17.17■□□□□ 0.34
Trim9Q8C7M3 Gm44394-201ENSMUST00000199558 138 ntBASIC17.17■□□□□ 0.34
Trim9Q8C7M3 Gm44484-201ENSMUST00000199873 138 ntBASIC17.17■□□□□ 0.34
Trim9Q8C7M3 Gm44466-201ENSMUST00000200264 138 ntBASIC17.17■□□□□ 0.34
Trim9Q8C7M3 Gm44359-201ENSMUST00000200671 138 ntBASIC17.17■□□□□ 0.34
Trim9Q8C7M3 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC17.17■□□□□ 0.34
Trim9Q8C7M3 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Trim9Q8C7M3 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
Trim9Q8C7M3 Gm10819-201ENSMUST00000099988 561 ntBASIC17.17■□□□□ 0.34
Trim9Q8C7M3 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim9Q8C7M3 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim9Q8C7M3 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim9Q8C7M3 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim9Q8C7M3 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim9Q8C7M3 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Trim9Q8C7M3 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim9Q8C7M3 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim9Q8C7M3 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Trim9Q8C7M3 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim9Q8C7M3 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim9Q8C7M3 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Trim9Q8C7M3 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim9Q8C7M3 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim9Q8C7M3 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC17.16■□□□□ 0.34
Trim9Q8C7M3 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC17.16■□□□□ 0.34
Trim9Q8C7M3 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
Trim9Q8C7M3 Gm15358-201ENSMUST00000119249 520 ntBASIC17.16■□□□□ 0.34
Trim9Q8C7M3 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC17.16■□□□□ 0.34
Trim9Q8C7M3 Gm11780-201ENSMUST00000136880 516 ntBASIC17.16■□□□□ 0.34
Trim9Q8C7M3 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC17.16■□□□□ 0.34
Trim9Q8C7M3 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Trim9Q8C7M3 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim9Q8C7M3 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim9Q8C7M3 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim9Q8C7M3 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim9Q8C7M3 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC17.16■□□□□ 0.34
Trim9Q8C7M3 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim9Q8C7M3 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim9Q8C7M3 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim9Q8C7M3 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Trim9Q8C7M3 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim9Q8C7M3 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim9Q8C7M3 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim9Q8C7M3 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim9Q8C7M3 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim9Q8C7M3 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim9Q8C7M3 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim9Q8C7M3 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim9Q8C7M3 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC17.15■□□□□ 0.34
Trim9Q8C7M3 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Trim9Q8C7M3 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Trim9Q8C7M3 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC17.15■□□□□ 0.34
Trim9Q8C7M3 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim9Q8C7M3 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC17.15■□□□□ 0.34
Trim9Q8C7M3 Gm7286-201ENSMUST00000182691 1007 ntBASIC17.15■□□□□ 0.34
Trim9Q8C7M3 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC17.15■□□□□ 0.34
Trim9Q8C7M3 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC17.15■□□□□ 0.34
Trim9Q8C7M3 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
Trim9Q8C7M3 AC159301.1-201ENSMUST00000225130 1182 ntBASIC17.15■□□□□ 0.34
Trim9Q8C7M3 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim9Q8C7M3 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC17.15■□□□□ 0.34
Trim9Q8C7M3 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC17.15■□□□□ 0.34
Trim9Q8C7M3 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Trim9Q8C7M3 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim9Q8C7M3 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim9Q8C7M3 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim9Q8C7M3 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim9Q8C7M3 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Trim9Q8C7M3 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim9Q8C7M3 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC17.14■□□□□ 0.33
Trim9Q8C7M3 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC17.14■□□□□ 0.33
Trim9Q8C7M3 Gm27646-201ENSMUST00000183989 110 ntBASIC17.14■□□□□ 0.33
Trim9Q8C7M3 Gm27459-201ENSMUST00000184860 107 ntBASIC17.14■□□□□ 0.33
Trim9Q8C7M3 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Trim9Q8C7M3 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Trim9Q8C7M3 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim9Q8C7M3 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Trim9Q8C7M3 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim9Q8C7M3 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC17.14■□□□□ 0.33
Trim9Q8C7M3 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim9Q8C7M3 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim9Q8C7M3 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim9Q8C7M3 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim9Q8C7M3 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim9Q8C7M3 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trim9Q8C7M3 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
Trim9Q8C7M3 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trim9Q8C7M3 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC17.13■□□□□ 0.33
Trim9Q8C7M3 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim9Q8C7M3 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC17.13■□□□□ 0.33
Trim9Q8C7M3 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC17.13■□□□□ 0.33
Trim9Q8C7M3 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim9Q8C7M3 Gm4535-201ENSMUST00000182274 558 ntBASIC17.13■□□□□ 0.33
Trim9Q8C7M3 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim9Q8C7M3 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms