Protein–RNA interactions for Protein: Q8BYH8

Chd9, Chromodomain-helicase-DNA-binding protein 9, mousemouse

Predictions only

Length 2,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd9Q8BYH8 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Chd9Q8BYH8 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Chd9Q8BYH8 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Chd9Q8BYH8 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Chd9Q8BYH8 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Chd9Q8BYH8 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Chd9Q8BYH8 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Chd9Q8BYH8 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Chd9Q8BYH8 Gm13517-201ENSMUST00000120782 1495 ntBASIC12.18□□□□□ -0.46
Chd9Q8BYH8 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
Chd9Q8BYH8 Gm18057-201ENSMUST00000208220 503 ntBASIC12.18□□□□□ -0.46
Chd9Q8BYH8 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC12.18□□□□□ -0.46
Chd9Q8BYH8 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Chd9Q8BYH8 Gm13294-201ENSMUST00000121757 1330 ntBASIC12.18□□□□□ -0.46
Chd9Q8BYH8 Gm8410-201ENSMUST00000117225 605 ntBASIC12.18□□□□□ -0.46
Chd9Q8BYH8 Gm17420-201ENSMUST00000164753 153 ntBASIC12.18□□□□□ -0.46
Chd9Q8BYH8 Gm37714-201ENSMUST00000194742 342 ntBASIC12.18□□□□□ -0.46
Chd9Q8BYH8 Gm18018-201ENSMUST00000198273 408 ntBASIC12.18□□□□□ -0.46
Chd9Q8BYH8 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Chd9Q8BYH8 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Chd9Q8BYH8 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Chd9Q8BYH8 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Chd9Q8BYH8 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Chd9Q8BYH8 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC12.18□□□□□ -0.46
Chd9Q8BYH8 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Chd9Q8BYH8 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Chd9Q8BYH8 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC12.18□□□□□ -0.46
Chd9Q8BYH8 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Chd9Q8BYH8 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Chd9Q8BYH8 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Chd9Q8BYH8 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Chd9Q8BYH8 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC12.17□□□□□ -0.46
Chd9Q8BYH8 Mir7070-201ENSMUST00000183657 86 ntBASIC12.17□□□□□ -0.46
Chd9Q8BYH8 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Chd9Q8BYH8 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Chd9Q8BYH8 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Chd9Q8BYH8 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Chd9Q8BYH8 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Chd9Q8BYH8 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Chd9Q8BYH8 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Chd9Q8BYH8 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Chd9Q8BYH8 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Chd9Q8BYH8 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Chd9Q8BYH8 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Chd9Q8BYH8 Gm6415-201ENSMUST00000118488 348 ntBASIC12.17□□□□□ -0.46
Chd9Q8BYH8 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC12.17□□□□□ -0.46
Chd9Q8BYH8 Gm25144-201ENSMUST00000179561 110 ntBASIC12.17□□□□□ -0.46
Chd9Q8BYH8 Gm25352-201ENSMUST00000179815 110 ntBASIC12.17□□□□□ -0.46
Chd9Q8BYH8 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Chd9Q8BYH8 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC12.17□□□□□ -0.46
Chd9Q8BYH8 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Chd9Q8BYH8 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Chd9Q8BYH8 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Chd9Q8BYH8 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Chd9Q8BYH8 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Chd9Q8BYH8 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Chd9Q8BYH8 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Chd9Q8BYH8 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC12.16□□□□□ -0.46
Chd9Q8BYH8 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC12.16□□□□□ -0.46
Chd9Q8BYH8 Gm18934-201ENSMUST00000216671 1044 ntBASIC12.16□□□□□ -0.46
Chd9Q8BYH8 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Chd9Q8BYH8 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Chd9Q8BYH8 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Chd9Q8BYH8 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Chd9Q8BYH8 AC025913.2-201ENSMUST00000220136 1766 ntBASIC12.16□□□□□ -0.46
Chd9Q8BYH8 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Chd9Q8BYH8 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC12.16□□□□□ -0.46
Chd9Q8BYH8 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC12.16□□□□□ -0.46
Chd9Q8BYH8 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC12.16□□□□□ -0.46
Chd9Q8BYH8 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Chd9Q8BYH8 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Chd9Q8BYH8 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Chd9Q8BYH8 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Chd9Q8BYH8 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC12.16□□□□□ -0.46
Chd9Q8BYH8 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Chd9Q8BYH8 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Chd9Q8BYH8 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Chd9Q8BYH8 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Chd9Q8BYH8 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC12.16□□□□□ -0.46
Chd9Q8BYH8 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Chd9Q8BYH8 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Chd9Q8BYH8 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Chd9Q8BYH8 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC12.16□□□□□ -0.46
Chd9Q8BYH8 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Chd9Q8BYH8 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Chd9Q8BYH8 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Chd9Q8BYH8 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Chd9Q8BYH8 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Chd9Q8BYH8 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC12.15□□□□□ -0.46
Chd9Q8BYH8 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Chd9Q8BYH8 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Chd9Q8BYH8 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Chd9Q8BYH8 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC12.15□□□□□ -0.46
Chd9Q8BYH8 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Chd9Q8BYH8 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Chd9Q8BYH8 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC12.15□□□□□ -0.46
Chd9Q8BYH8 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC12.15□□□□□ -0.46
Chd9Q8BYH8 Gm7172-201ENSMUST00000218047 1152 ntBASIC12.15□□□□□ -0.46
Chd9Q8BYH8 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
Chd9Q8BYH8 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms