Protein–RNA interactions for Protein: Q8BRE0

Rd3, Protein RD3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rd3Q8BRE0 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rd3Q8BRE0 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Rd3Q8BRE0 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Rd3Q8BRE0 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rd3Q8BRE0 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rd3Q8BRE0 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Rd3Q8BRE0 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rd3Q8BRE0 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rd3Q8BRE0 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Rd3Q8BRE0 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rd3Q8BRE0 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rd3Q8BRE0 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC16.47■□□□□ 0.23
Rd3Q8BRE0 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rd3Q8BRE0 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rd3Q8BRE0 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rd3Q8BRE0 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Rd3Q8BRE0 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rd3Q8BRE0 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rd3Q8BRE0 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC16.47■□□□□ 0.23
Rd3Q8BRE0 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rd3Q8BRE0 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rd3Q8BRE0 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rd3Q8BRE0 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC16.47■□□□□ 0.23
Rd3Q8BRE0 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Rd3Q8BRE0 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rd3Q8BRE0 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rd3Q8BRE0 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rd3Q8BRE0 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Rd3Q8BRE0 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rd3Q8BRE0 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC16.47■□□□□ 0.23
Rd3Q8BRE0 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rd3Q8BRE0 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rd3Q8BRE0 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rd3Q8BRE0 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Rd3Q8BRE0 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rd3Q8BRE0 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rd3Q8BRE0 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rd3Q8BRE0 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC16.46■□□□□ 0.23
Rd3Q8BRE0 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC16.46■□□□□ 0.23
Rd3Q8BRE0 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC16.46■□□□□ 0.23
Rd3Q8BRE0 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
Rd3Q8BRE0 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Rd3Q8BRE0 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC16.46■□□□□ 0.23
Rd3Q8BRE0 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC16.46■□□□□ 0.23
Rd3Q8BRE0 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rd3Q8BRE0 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC16.46■□□□□ 0.23
Rd3Q8BRE0 AC124549.3-201ENSMUST00000225541 367 ntBASIC16.46■□□□□ 0.23
Rd3Q8BRE0 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC16.46■□□□□ 0.23
Rd3Q8BRE0 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Rd3Q8BRE0 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC16.46■□□□□ 0.23
Rd3Q8BRE0 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rd3Q8BRE0 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Rd3Q8BRE0 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Rd3Q8BRE0 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
Rd3Q8BRE0 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Rd3Q8BRE0 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Rd3Q8BRE0 Gm5366-201ENSMUST00000215494 1338 ntBASIC16.45■□□□□ 0.22
Rd3Q8BRE0 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Rd3Q8BRE0 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rd3Q8BRE0 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Rd3Q8BRE0 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Rd3Q8BRE0 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC16.45■□□□□ 0.22
Rd3Q8BRE0 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Rd3Q8BRE0 AC158538.2-201ENSMUST00000225455 906 ntBASIC16.45■□□□□ 0.22
Rd3Q8BRE0 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
Rd3Q8BRE0 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Rd3Q8BRE0 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Rd3Q8BRE0 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rd3Q8BRE0 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Rd3Q8BRE0 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rd3Q8BRE0 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rd3Q8BRE0 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rd3Q8BRE0 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rd3Q8BRE0 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Rd3Q8BRE0 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rd3Q8BRE0 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rd3Q8BRE0 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Rd3Q8BRE0 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC16.44■□□□□ 0.22
Rd3Q8BRE0 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rd3Q8BRE0 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rd3Q8BRE0 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rd3Q8BRE0 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Rd3Q8BRE0 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Rd3Q8BRE0 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Rd3Q8BRE0 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rd3Q8BRE0 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC16.44■□□□□ 0.22
Rd3Q8BRE0 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC16.44■□□□□ 0.22
Rd3Q8BRE0 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rd3Q8BRE0 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rd3Q8BRE0 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rd3Q8BRE0 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC16.44■□□□□ 0.22
Rd3Q8BRE0 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC16.44■□□□□ 0.22
Rd3Q8BRE0 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rd3Q8BRE0 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rd3Q8BRE0 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Rd3Q8BRE0 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rd3Q8BRE0 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rd3Q8BRE0 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Rd3Q8BRE0 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Rd3Q8BRE0 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms