Protein–RNA interactions for Protein: Q8BMK4

Ckap4, Cytoskeleton-associated protein 4, mousemouse

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap4Q8BMK4 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ckap4Q8BMK4 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ckap4Q8BMK4 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ckap4Q8BMK4 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ckap4Q8BMK4 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ckap4Q8BMK4 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Ckap4Q8BMK4 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Ckap4Q8BMK4 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ckap4Q8BMK4 Gm6728-201ENSMUST00000178117 1065 ntBASIC14.78□□□□□ -0.04
Ckap4Q8BMK4 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Ckap4Q8BMK4 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ckap4Q8BMK4 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ckap4Q8BMK4 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ckap4Q8BMK4 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ckap4Q8BMK4 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ckap4Q8BMK4 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ckap4Q8BMK4 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Ckap4Q8BMK4 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ckap4Q8BMK4 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ckap4Q8BMK4 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ckap4Q8BMK4 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ckap4Q8BMK4 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ckap4Q8BMK4 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Ckap4Q8BMK4 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ckap4Q8BMK4 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Ckap4Q8BMK4 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC14.77□□□□□ -0.04
Ckap4Q8BMK4 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Ckap4Q8BMK4 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ckap4Q8BMK4 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC14.77□□□□□ -0.05
Ckap4Q8BMK4 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC14.77□□□□□ -0.05
Ckap4Q8BMK4 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC14.77□□□□□ -0.05
Ckap4Q8BMK4 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Ckap4Q8BMK4 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC14.77□□□□□ -0.05
Ckap4Q8BMK4 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Ckap4Q8BMK4 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ckap4Q8BMK4 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ckap4Q8BMK4 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ckap4Q8BMK4 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Ckap4Q8BMK4 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ckap4Q8BMK4 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ckap4Q8BMK4 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ckap4Q8BMK4 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ckap4Q8BMK4 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Ckap4Q8BMK4 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ckap4Q8BMK4 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ckap4Q8BMK4 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ckap4Q8BMK4 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Ckap4Q8BMK4 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ckap4Q8BMK4 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ckap4Q8BMK4 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Ckap4Q8BMK4 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC14.76□□□□□ -0.05
Ckap4Q8BMK4 Gm11950-201ENSMUST00000121615 838 ntBASIC14.76□□□□□ -0.05
Ckap4Q8BMK4 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Ckap4Q8BMK4 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Ckap4Q8BMK4 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Ckap4Q8BMK4 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Ckap4Q8BMK4 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Ckap4Q8BMK4 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ckap4Q8BMK4 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ckap4Q8BMK4 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ckap4Q8BMK4 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ckap4Q8BMK4 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ckap4Q8BMK4 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ckap4Q8BMK4 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ckap4Q8BMK4 Gm37912-201ENSMUST00000191895 3076 ntBASIC14.76□□□□□ -0.05
Ckap4Q8BMK4 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC14.76□□□□□ -0.05
Ckap4Q8BMK4 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Ckap4Q8BMK4 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Ckap4Q8BMK4 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ckap4Q8BMK4 Rbfox2-206ENSMUST00000227314 1810 ntBASIC14.76□□□□□ -0.05
Ckap4Q8BMK4 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ckap4Q8BMK4 Gm8258-201ENSMUST00000055593 1449 ntBASIC14.75□□□□□ -0.05
Ckap4Q8BMK4 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Ckap4Q8BMK4 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Ckap4Q8BMK4 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ckap4Q8BMK4 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ckap4Q8BMK4 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ckap4Q8BMK4 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Ckap4Q8BMK4 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Ckap4Q8BMK4 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ckap4Q8BMK4 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC14.75□□□□□ -0.05
Ckap4Q8BMK4 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Ckap4Q8BMK4 Gm44430-201ENSMUST00000203376 995 ntBASIC14.75□□□□□ -0.05
Ckap4Q8BMK4 Gm45328-201ENSMUST00000210942 917 ntBASIC14.75□□□□□ -0.05
Ckap4Q8BMK4 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ckap4Q8BMK4 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ckap4Q8BMK4 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ckap4Q8BMK4 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ckap4Q8BMK4 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ckap4Q8BMK4 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Ckap4Q8BMK4 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ckap4Q8BMK4 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ckap4Q8BMK4 AC174678.1-201ENSMUST00000228007 2749 ntBASIC14.75□□□□□ -0.05
Ckap4Q8BMK4 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC14.75□□□□□ -0.05
Ckap4Q8BMK4 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ckap4Q8BMK4 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Ckap4Q8BMK4 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ckap4Q8BMK4 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ckap4Q8BMK4 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ckap4Q8BMK4 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms