Protein–RNA interactions for Protein: Q8BKX6

Smg1, Serine/threonine-protein kinase SMG1, mousemouse

Known RBP Predictions only

Length 3,658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg1Q8BKX6 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Smg1Q8BKX6 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC13.06□□□□□ -0.32
Smg1Q8BKX6 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Smg1Q8BKX6 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC13.06□□□□□ -0.32
Smg1Q8BKX6 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC13.06□□□□□ -0.32
Smg1Q8BKX6 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Smg1Q8BKX6 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC13.06□□□□□ -0.32
Smg1Q8BKX6 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Smg1Q8BKX6 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC13.06□□□□□ -0.32
Smg1Q8BKX6 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Smg1Q8BKX6 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Smg1Q8BKX6 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Smg1Q8BKX6 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Smg1Q8BKX6 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Smg1Q8BKX6 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Smg1Q8BKX6 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC13.05□□□□□ -0.32
Smg1Q8BKX6 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
Smg1Q8BKX6 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Smg1Q8BKX6 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Smg1Q8BKX6 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
Smg1Q8BKX6 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Smg1Q8BKX6 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Smg1Q8BKX6 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Smg1Q8BKX6 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC13.05□□□□□ -0.32
Smg1Q8BKX6 AC124732.1-201ENSMUST00000221551 910 ntBASIC13.05□□□□□ -0.32
Smg1Q8BKX6 Gm6888-201ENSMUST00000221983 706 ntBASIC13.05□□□□□ -0.32
Smg1Q8BKX6 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Smg1Q8BKX6 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Smg1Q8BKX6 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Smg1Q8BKX6 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Smg1Q8BKX6 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Smg1Q8BKX6 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Smg1Q8BKX6 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Smg1Q8BKX6 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Smg1Q8BKX6 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Smg1Q8BKX6 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Smg1Q8BKX6 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC13.04□□□□□ -0.32
Smg1Q8BKX6 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC13.04□□□□□ -0.32
Smg1Q8BKX6 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smg1Q8BKX6 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Smg1Q8BKX6 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smg1Q8BKX6 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Smg1Q8BKX6 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Smg1Q8BKX6 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smg1Q8BKX6 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Smg1Q8BKX6 Gm13015-201ENSMUST00000118674 204 ntBASIC13.04□□□□□ -0.32
Smg1Q8BKX6 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC13.04□□□□□ -0.32
Smg1Q8BKX6 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC13.04□□□□□ -0.32
Smg1Q8BKX6 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smg1Q8BKX6 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smg1Q8BKX6 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smg1Q8BKX6 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smg1Q8BKX6 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smg1Q8BKX6 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smg1Q8BKX6 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Smg1Q8BKX6 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smg1Q8BKX6 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smg1Q8BKX6 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smg1Q8BKX6 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Smg1Q8BKX6 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smg1Q8BKX6 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smg1Q8BKX6 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smg1Q8BKX6 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smg1Q8BKX6 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smg1Q8BKX6 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC13.03□□□□□ -0.32
Smg1Q8BKX6 Gm6218-201ENSMUST00000219812 628 ntBASIC13.03□□□□□ -0.32
Smg1Q8BKX6 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Smg1Q8BKX6 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Smg1Q8BKX6 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Smg1Q8BKX6 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Smg1Q8BKX6 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Smg1Q8BKX6 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Smg1Q8BKX6 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC13.03□□□□□ -0.32
Smg1Q8BKX6 Gm8410-201ENSMUST00000117225 605 ntBASIC13.03□□□□□ -0.32
Smg1Q8BKX6 Gm16198-201ENSMUST00000118766 670 ntBASIC13.03□□□□□ -0.32
Smg1Q8BKX6 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Smg1Q8BKX6 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Smg1Q8BKX6 Gm9908-201ENSMUST00000211534 448 ntBASIC13.03□□□□□ -0.32
Smg1Q8BKX6 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Smg1Q8BKX6 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Smg1Q8BKX6 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Smg1Q8BKX6 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Smg1Q8BKX6 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Smg1Q8BKX6 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Smg1Q8BKX6 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Smg1Q8BKX6 Gm6415-201ENSMUST00000118488 348 ntBASIC13.03□□□□□ -0.32
Smg1Q8BKX6 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Smg1Q8BKX6 Gm27838-201ENSMUST00000184829 128 ntBASIC13.03□□□□□ -0.32
Smg1Q8BKX6 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC13.03□□□□□ -0.32
Smg1Q8BKX6 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC13.03□□□□□ -0.32
Smg1Q8BKX6 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Smg1Q8BKX6 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Smg1Q8BKX6 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Smg1Q8BKX6 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC13.03□□□□□ -0.32
Smg1Q8BKX6 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC13.02□□□□□ -0.32
Smg1Q8BKX6 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Smg1Q8BKX6 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Smg1Q8BKX6 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Smg1Q8BKX6 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Smg1Q8BKX6 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC13.02□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms