Protein–RNA interactions for Protein: Q8BGY9

Slc5a7, High affinity choline transporter 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc5a7Q8BGY9 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Slc5a7Q8BGY9 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Slc5a7Q8BGY9 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Slc5a7Q8BGY9 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Slc5a7Q8BGY9 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Slc5a7Q8BGY9 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
Slc5a7Q8BGY9 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Slc5a7Q8BGY9 Trmt13-210ENSMUST00000198454 880 ntBASIC13.67□□□□□ -0.22
Slc5a7Q8BGY9 Timm23-208ENSMUST00000226683 750 ntBASIC13.67□□□□□ -0.22
Slc5a7Q8BGY9 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Slc5a7Q8BGY9 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC13.67□□□□□ -0.22
Slc5a7Q8BGY9 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Slc5a7Q8BGY9 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Slc5a7Q8BGY9 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Slc5a7Q8BGY9 Gm12620-201ENSMUST00000119791 1986 ntBASIC13.67□□□□□ -0.22
Slc5a7Q8BGY9 Gm12612-201ENSMUST00000140182 1986 ntBASIC13.67□□□□□ -0.22
Slc5a7Q8BGY9 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC13.67□□□□□ -0.22
Slc5a7Q8BGY9 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Slc5a7Q8BGY9 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Slc5a7Q8BGY9 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Slc5a7Q8BGY9 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Slc5a7Q8BGY9 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Slc5a7Q8BGY9 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Slc5a7Q8BGY9 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Slc5a7Q8BGY9 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Slc5a7Q8BGY9 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Slc5a7Q8BGY9 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Slc5a7Q8BGY9 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Slc5a7Q8BGY9 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Slc5a7Q8BGY9 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Slc5a7Q8BGY9 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Slc5a7Q8BGY9 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Slc5a7Q8BGY9 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
Slc5a7Q8BGY9 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Slc5a7Q8BGY9 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Slc5a7Q8BGY9 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Slc5a7Q8BGY9 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Slc5a7Q8BGY9 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Slc5a7Q8BGY9 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Slc5a7Q8BGY9 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Slc5a7Q8BGY9 Gm11336-201ENSMUST00000118168 334 ntBASIC13.66□□□□□ -0.22
Slc5a7Q8BGY9 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC13.66□□□□□ -0.22
Slc5a7Q8BGY9 Gm37856-201ENSMUST00000191634 999 ntBASIC13.66□□□□□ -0.22
Slc5a7Q8BGY9 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Slc5a7Q8BGY9 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Slc5a7Q8BGY9 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Slc5a7Q8BGY9 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Slc5a7Q8BGY9 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Slc5a7Q8BGY9 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Slc5a7Q8BGY9 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC13.66□□□□□ -0.22
Slc5a7Q8BGY9 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Slc5a7Q8BGY9 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Slc5a7Q8BGY9 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Slc5a7Q8BGY9 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Slc5a7Q8BGY9 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Slc5a7Q8BGY9 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Slc5a7Q8BGY9 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Slc5a7Q8BGY9 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Slc5a7Q8BGY9 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Slc5a7Q8BGY9 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC13.65□□□□□ -0.22
Slc5a7Q8BGY9 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Slc5a7Q8BGY9 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Slc5a7Q8BGY9 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Slc5a7Q8BGY9 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Slc5a7Q8BGY9 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Slc5a7Q8BGY9 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Slc5a7Q8BGY9 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Slc5a7Q8BGY9 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
Slc5a7Q8BGY9 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Slc5a7Q8BGY9 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Slc5a7Q8BGY9 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Slc5a7Q8BGY9 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Slc5a7Q8BGY9 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Slc5a7Q8BGY9 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC13.65□□□□□ -0.22
Slc5a7Q8BGY9 Gm44291-201ENSMUST00000203102 2865 ntBASIC13.65□□□□□ -0.22
Slc5a7Q8BGY9 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC13.65□□□□□ -0.23
Slc5a7Q8BGY9 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Slc5a7Q8BGY9 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Slc5a7Q8BGY9 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Slc5a7Q8BGY9 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Slc5a7Q8BGY9 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC13.64□□□□□ -0.23
Slc5a7Q8BGY9 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Slc5a7Q8BGY9 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Slc5a7Q8BGY9 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Slc5a7Q8BGY9 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Slc5a7Q8BGY9 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Slc5a7Q8BGY9 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
Slc5a7Q8BGY9 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Slc5a7Q8BGY9 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Slc5a7Q8BGY9 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Slc5a7Q8BGY9 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Slc5a7Q8BGY9 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC13.64□□□□□ -0.23
Slc5a7Q8BGY9 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Slc5a7Q8BGY9 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Slc5a7Q8BGY9 Otx2os1-204ENSMUST00000227221 751 ntBASIC13.64□□□□□ -0.23
Slc5a7Q8BGY9 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Slc5a7Q8BGY9 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Slc5a7Q8BGY9 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Slc5a7Q8BGY9 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Slc5a7Q8BGY9 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms