Protein–RNA interactions for Protein: Q8BGE7

Trim6, Tripartite motif-containing protein 6, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim6Q8BGE7 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim6Q8BGE7 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim6Q8BGE7 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Trim6Q8BGE7 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Trim6Q8BGE7 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim6Q8BGE7 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim6Q8BGE7 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim6Q8BGE7 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC16.58■□□□□ 0.24
Trim6Q8BGE7 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Trim6Q8BGE7 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim6Q8BGE7 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim6Q8BGE7 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim6Q8BGE7 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Trim6Q8BGE7 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Trim6Q8BGE7 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim6Q8BGE7 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim6Q8BGE7 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim6Q8BGE7 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
Trim6Q8BGE7 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC16.57■□□□□ 0.24
Trim6Q8BGE7 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Trim6Q8BGE7 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim6Q8BGE7 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC16.57■□□□□ 0.24
Trim6Q8BGE7 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim6Q8BGE7 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim6Q8BGE7 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Trim6Q8BGE7 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim6Q8BGE7 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim6Q8BGE7 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim6Q8BGE7 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Trim6Q8BGE7 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim6Q8BGE7 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim6Q8BGE7 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim6Q8BGE7 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC16.57■□□□□ 0.24
Trim6Q8BGE7 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim6Q8BGE7 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Trim6Q8BGE7 Gm16425-201ENSMUST00000118143 3130 ntBASIC16.56■□□□□ 0.24
Trim6Q8BGE7 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Trim6Q8BGE7 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim6Q8BGE7 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim6Q8BGE7 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Trim6Q8BGE7 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim6Q8BGE7 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim6Q8BGE7 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim6Q8BGE7 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim6Q8BGE7 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim6Q8BGE7 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC16.56■□□□□ 0.24
Trim6Q8BGE7 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
Trim6Q8BGE7 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Trim6Q8BGE7 Gm27389-201ENSMUST00000183622 195 ntBASIC16.56■□□□□ 0.24
Trim6Q8BGE7 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC16.56■□□□□ 0.24
Trim6Q8BGE7 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim6Q8BGE7 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim6Q8BGE7 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim6Q8BGE7 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Trim6Q8BGE7 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC16.56■□□□□ 0.24
Trim6Q8BGE7 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Trim6Q8BGE7 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim6Q8BGE7 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim6Q8BGE7 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim6Q8BGE7 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC16.56■□□□□ 0.24
Trim6Q8BGE7 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim6Q8BGE7 Gm37728-201ENSMUST00000195025 2292 ntBASIC16.56■□□□□ 0.24
Trim6Q8BGE7 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim6Q8BGE7 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim6Q8BGE7 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Trim6Q8BGE7 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC16.55■□□□□ 0.24
Trim6Q8BGE7 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trim6Q8BGE7 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim6Q8BGE7 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trim6Q8BGE7 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Trim6Q8BGE7 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Trim6Q8BGE7 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim6Q8BGE7 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim6Q8BGE7 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC16.55■□□□□ 0.24
Trim6Q8BGE7 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim6Q8BGE7 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trim6Q8BGE7 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC16.55■□□□□ 0.24
Trim6Q8BGE7 Gm10052-201ENSMUST00000168019 960 ntBASIC16.55■□□□□ 0.24
Trim6Q8BGE7 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim6Q8BGE7 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim6Q8BGE7 Gm7729-201ENSMUST00000050143 801 ntBASIC16.55■□□□□ 0.24
Trim6Q8BGE7 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim6Q8BGE7 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim6Q8BGE7 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Trim6Q8BGE7 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC16.55■□□□□ 0.24
Trim6Q8BGE7 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Trim6Q8BGE7 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim6Q8BGE7 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim6Q8BGE7 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trim6Q8BGE7 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim6Q8BGE7 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim6Q8BGE7 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim6Q8BGE7 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim6Q8BGE7 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Trim6Q8BGE7 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Trim6Q8BGE7 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim6Q8BGE7 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC16.54■□□□□ 0.24
Trim6Q8BGE7 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim6Q8BGE7 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim6Q8BGE7 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms