Protein–RNA interactions for Protein: Q811I0

Atpaf1, ATP synthase mitochondrial F1 complex assembly factor 1, mousemouse

Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atpaf1Q811I0 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Atpaf1Q811I0 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Atpaf1Q811I0 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Atpaf1Q811I0 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Atpaf1Q811I0 Slc35b2-207ENSMUST00000226086 850 ntBASIC12.75□□□□□ -0.37
Atpaf1Q811I0 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Atpaf1Q811I0 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Atpaf1Q811I0 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Atpaf1Q811I0 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Atpaf1Q811I0 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Atpaf1Q811I0 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Atpaf1Q811I0 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Atpaf1Q811I0 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Atpaf1Q811I0 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
Atpaf1Q811I0 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Atpaf1Q811I0 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Atpaf1Q811I0 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Atpaf1Q811I0 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Atpaf1Q811I0 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Atpaf1Q811I0 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Atpaf1Q811I0 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Atpaf1Q811I0 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Atpaf1Q811I0 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC12.74□□□□□ -0.37
Atpaf1Q811I0 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Atpaf1Q811I0 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Atpaf1Q811I0 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Atpaf1Q811I0 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Atpaf1Q811I0 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC12.74□□□□□ -0.37
Atpaf1Q811I0 AC154855.1-201ENSMUST00000227353 1458 ntBASIC12.74□□□□□ -0.37
Atpaf1Q811I0 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Atpaf1Q811I0 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Atpaf1Q811I0 Gm43859-201ENSMUST00000200075 1412 ntBASIC12.74□□□□□ -0.37
Atpaf1Q811I0 Gm8784-201ENSMUST00000222096 1435 ntBASIC12.74□□□□□ -0.37
Atpaf1Q811I0 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC12.74□□□□□ -0.37
Atpaf1Q811I0 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Atpaf1Q811I0 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Atpaf1Q811I0 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Atpaf1Q811I0 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Atpaf1Q811I0 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Atpaf1Q811I0 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Atpaf1Q811I0 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Atpaf1Q811I0 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Atpaf1Q811I0 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC12.74□□□□□ -0.37
Atpaf1Q811I0 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Atpaf1Q811I0 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Atpaf1Q811I0 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Atpaf1Q811I0 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Atpaf1Q811I0 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
Atpaf1Q811I0 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Atpaf1Q811I0 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Atpaf1Q811I0 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Atpaf1Q811I0 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Atpaf1Q811I0 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Atpaf1Q811I0 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Atpaf1Q811I0 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Atpaf1Q811I0 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC12.73□□□□□ -0.37
Atpaf1Q811I0 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Atpaf1Q811I0 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Atpaf1Q811I0 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Atpaf1Q811I0 Gm12896-201ENSMUST00000118430 226 ntBASIC12.73□□□□□ -0.37
Atpaf1Q811I0 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Atpaf1Q811I0 Gm3807-201ENSMUST00000193520 1168 ntBASIC12.73□□□□□ -0.37
Atpaf1Q811I0 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Atpaf1Q811I0 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Atpaf1Q811I0 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Atpaf1Q811I0 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Atpaf1Q811I0 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Atpaf1Q811I0 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Atpaf1Q811I0 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC12.73□□□□□ -0.37
Atpaf1Q811I0 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Atpaf1Q811I0 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Atpaf1Q811I0 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Atpaf1Q811I0 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
Atpaf1Q811I0 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Atpaf1Q811I0 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC12.73□□□□□ -0.37
Atpaf1Q811I0 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Atpaf1Q811I0 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Atpaf1Q811I0 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Atpaf1Q811I0 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC12.73□□□□□ -0.37
Atpaf1Q811I0 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC12.73□□□□□ -0.37
Atpaf1Q811I0 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Atpaf1Q811I0 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Atpaf1Q811I0 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Atpaf1Q811I0 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Atpaf1Q811I0 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Atpaf1Q811I0 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Atpaf1Q811I0 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Atpaf1Q811I0 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Atpaf1Q811I0 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC12.72□□□□□ -0.37
Atpaf1Q811I0 Gm43205-201ENSMUST00000198622 1968 ntBASIC12.72□□□□□ -0.37
Atpaf1Q811I0 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Atpaf1Q811I0 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Atpaf1Q811I0 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Atpaf1Q811I0 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Atpaf1Q811I0 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Atpaf1Q811I0 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Atpaf1Q811I0 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC12.72□□□□□ -0.37
Atpaf1Q811I0 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Atpaf1Q811I0 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Atpaf1Q811I0 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms