Protein–RNA interactions for Protein: Q80YF6

Upk3b, Uroplakin-3b, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bQ80YF6 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Upk3bQ80YF6 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Upk3bQ80YF6 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Upk3bQ80YF6 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Upk3bQ80YF6 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Upk3bQ80YF6 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC13.18□□□□□ -0.3
Upk3bQ80YF6 Gm20472-201ENSMUST00000174403 1240 ntBASIC13.18□□□□□ -0.3
Upk3bQ80YF6 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC13.18□□□□□ -0.3
Upk3bQ80YF6 AC134329.2-201ENSMUST00000217897 428 ntBASIC13.18□□□□□ -0.3
Upk3bQ80YF6 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Upk3bQ80YF6 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Upk3bQ80YF6 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC13.18□□□□□ -0.3
Upk3bQ80YF6 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Upk3bQ80YF6 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Upk3bQ80YF6 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC13.18□□□□□ -0.3
Upk3bQ80YF6 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Upk3bQ80YF6 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Upk3bQ80YF6 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Upk3bQ80YF6 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC13.18□□□□□ -0.3
Upk3bQ80YF6 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Upk3bQ80YF6 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Upk3bQ80YF6 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC13.17□□□□□ -0.3
Upk3bQ80YF6 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Upk3bQ80YF6 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Upk3bQ80YF6 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Upk3bQ80YF6 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Upk3bQ80YF6 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Upk3bQ80YF6 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Upk3bQ80YF6 Gm9484-201ENSMUST00000195892 1159 ntBASIC13.17□□□□□ -0.3
Upk3bQ80YF6 Gm21559-201ENSMUST00000220638 855 ntBASIC13.17□□□□□ -0.3
Upk3bQ80YF6 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Upk3bQ80YF6 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Upk3bQ80YF6 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC13.17□□□□□ -0.3
Upk3bQ80YF6 Gm8587-201ENSMUST00000076538 843 ntBASIC13.17□□□□□ -0.3
Upk3bQ80YF6 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC13.17□□□□□ -0.3
Upk3bQ80YF6 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Upk3bQ80YF6 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Upk3bQ80YF6 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Upk3bQ80YF6 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Upk3bQ80YF6 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Upk3bQ80YF6 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
Upk3bQ80YF6 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Upk3bQ80YF6 Wnt10b-206ENSMUST00000228546 2709 ntBASIC13.17□□□□□ -0.3
Upk3bQ80YF6 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Upk3bQ80YF6 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Upk3bQ80YF6 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Upk3bQ80YF6 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC13.16□□□□□ -0.3
Upk3bQ80YF6 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Upk3bQ80YF6 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Upk3bQ80YF6 Gm8784-201ENSMUST00000222096 1435 ntBASIC13.16□□□□□ -0.3
Upk3bQ80YF6 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Upk3bQ80YF6 Gm11355-201ENSMUST00000121120 306 ntBASIC13.16□□□□□ -0.3
Upk3bQ80YF6 Gm7889-201ENSMUST00000185591 958 ntBASIC13.16□□□□□ -0.3
Upk3bQ80YF6 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Upk3bQ80YF6 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Upk3bQ80YF6 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Upk3bQ80YF6 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Upk3bQ80YF6 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Upk3bQ80YF6 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Upk3bQ80YF6 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Upk3bQ80YF6 Gm7669-201ENSMUST00000210184 1603 ntBASIC13.16□□□□□ -0.3
Upk3bQ80YF6 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Upk3bQ80YF6 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Upk3bQ80YF6 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Upk3bQ80YF6 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Upk3bQ80YF6 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Upk3bQ80YF6 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Upk3bQ80YF6 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC13.16□□□□□ -0.3
Upk3bQ80YF6 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Upk3bQ80YF6 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Upk3bQ80YF6 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Upk3bQ80YF6 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Upk3bQ80YF6 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Upk3bQ80YF6 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Upk3bQ80YF6 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Upk3bQ80YF6 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Upk3bQ80YF6 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Upk3bQ80YF6 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Upk3bQ80YF6 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Upk3bQ80YF6 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Upk3bQ80YF6 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Upk3bQ80YF6 AC174678.1-201ENSMUST00000228007 2749 ntBASIC13.15□□□□□ -0.3
Upk3bQ80YF6 Gm43598-201ENSMUST00000202482 2479 ntBASIC13.15□□□□□ -0.3
Upk3bQ80YF6 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Upk3bQ80YF6 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Upk3bQ80YF6 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Upk3bQ80YF6 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Upk3bQ80YF6 Gm11839-201ENSMUST00000120647 1953 ntBASIC13.15□□□□□ -0.3
Upk3bQ80YF6 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Upk3bQ80YF6 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC13.15□□□□□ -0.3
Upk3bQ80YF6 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Upk3bQ80YF6 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC13.15□□□□□ -0.3
Upk3bQ80YF6 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC13.15□□□□□ -0.3
Upk3bQ80YF6 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Upk3bQ80YF6 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Upk3bQ80YF6 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Upk3bQ80YF6 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Upk3bQ80YF6 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Upk3bQ80YF6 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Upk3bQ80YF6 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms