Protein–RNA interactions for Protein: Q80WV7

Srrm3, Serine/arginine repetitive matrix protein 3, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm3Q80WV7 Gm16061-201ENSMUST00000122167 857 ntBASIC16.23■□□□□ 0.19
Srrm3Q80WV7 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Srrm3Q80WV7 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC16.23■□□□□ 0.19
Srrm3Q80WV7 Gm27389-201ENSMUST00000183622 195 ntBASIC16.23■□□□□ 0.19
Srrm3Q80WV7 Gm18421-201ENSMUST00000204122 625 ntBASIC16.23■□□□□ 0.19
Srrm3Q80WV7 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Srrm3Q80WV7 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Srrm3Q80WV7 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Srrm3Q80WV7 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Srrm3Q80WV7 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC16.23■□□□□ 0.19
Srrm3Q80WV7 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Srrm3Q80WV7 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Srrm3Q80WV7 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Srrm3Q80WV7 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Srrm3Q80WV7 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Srrm3Q80WV7 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Srrm3Q80WV7 Gm12620-201ENSMUST00000119791 1986 ntBASIC16.22■□□□□ 0.19
Srrm3Q80WV7 Gm12612-201ENSMUST00000140182 1986 ntBASIC16.22■□□□□ 0.19
Srrm3Q80WV7 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Srrm3Q80WV7 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Srrm3Q80WV7 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC16.22■□□□□ 0.19
Srrm3Q80WV7 Gm37305-201ENSMUST00000195714 4279 ntBASIC16.22■□□□□ 0.19
Srrm3Q80WV7 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Srrm3Q80WV7 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Srrm3Q80WV7 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Srrm3Q80WV7 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC16.22■□□□□ 0.19
Srrm3Q80WV7 Gm43073-201ENSMUST00000198200 1189 ntBASIC16.22■□□□□ 0.19
Srrm3Q80WV7 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC16.22■□□□□ 0.19
Srrm3Q80WV7 Gm21559-201ENSMUST00000220638 855 ntBASIC16.22■□□□□ 0.19
Srrm3Q80WV7 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Srrm3Q80WV7 Gm8587-201ENSMUST00000076538 843 ntBASIC16.22■□□□□ 0.19
Srrm3Q80WV7 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Srrm3Q80WV7 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC16.22■□□□□ 0.19
Srrm3Q80WV7 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Srrm3Q80WV7 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Srrm3Q80WV7 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Srrm3Q80WV7 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Srrm3Q80WV7 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Srrm3Q80WV7 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC16.22■□□□□ 0.19
Srrm3Q80WV7 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Srrm3Q80WV7 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Srrm3Q80WV7 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Srrm3Q80WV7 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Srrm3Q80WV7 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Srrm3Q80WV7 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Srrm3Q80WV7 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Srrm3Q80WV7 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Srrm3Q80WV7 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Srrm3Q80WV7 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
Srrm3Q80WV7 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Srrm3Q80WV7 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC16.21■□□□□ 0.19
Srrm3Q80WV7 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Srrm3Q80WV7 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Srrm3Q80WV7 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Srrm3Q80WV7 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Srrm3Q80WV7 Sorbs3-204ENSMUST00000227929 2460 ntBASIC16.21■□□□□ 0.19
Srrm3Q80WV7 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Srrm3Q80WV7 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC16.21■□□□□ 0.19
Srrm3Q80WV7 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Srrm3Q80WV7 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Srrm3Q80WV7 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Srrm3Q80WV7 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC16.21■□□□□ 0.19
Srrm3Q80WV7 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Srrm3Q80WV7 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC16.21■□□□□ 0.19
Srrm3Q80WV7 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC16.21■□□□□ 0.19
Srrm3Q80WV7 AC132104.2-201ENSMUST00000215011 266 ntBASIC16.21■□□□□ 0.19
Srrm3Q80WV7 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Srrm3Q80WV7 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Srrm3Q80WV7 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Srrm3Q80WV7 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC16.21■□□□□ 0.19
Srrm3Q80WV7 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC16.21■□□□□ 0.19
Srrm3Q80WV7 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Srrm3Q80WV7 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Srrm3Q80WV7 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Srrm3Q80WV7 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Srrm3Q80WV7 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
Srrm3Q80WV7 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC16.21■□□□□ 0.18
Srrm3Q80WV7 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Srrm3Q80WV7 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Srrm3Q80WV7 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Srrm3Q80WV7 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Srrm3Q80WV7 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC16.2■□□□□ 0.18
Srrm3Q80WV7 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Srrm3Q80WV7 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
Srrm3Q80WV7 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Srrm3Q80WV7 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Srrm3Q80WV7 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
Srrm3Q80WV7 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Srrm3Q80WV7 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC16.2■□□□□ 0.18
Srrm3Q80WV7 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Srrm3Q80WV7 Gm27357-201ENSMUST00000183754 135 ntBASIC16.2■□□□□ 0.18
Srrm3Q80WV7 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC16.2■□□□□ 0.18
Srrm3Q80WV7 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC16.2■□□□□ 0.18
Srrm3Q80WV7 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Srrm3Q80WV7 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Srrm3Q80WV7 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Srrm3Q80WV7 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Srrm3Q80WV7 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Srrm3Q80WV7 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Srrm3Q80WV7 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms