Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pif1Q80SX8 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Pif1Q80SX8 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Pif1Q80SX8 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pif1Q80SX8 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pif1Q80SX8 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Pif1Q80SX8 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Pif1Q80SX8 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pif1Q80SX8 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
Pif1Q80SX8 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pif1Q80SX8 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Pif1Q80SX8 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pif1Q80SX8 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC14.34□□□□□ -0.11
Pif1Q80SX8 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
Pif1Q80SX8 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC14.34□□□□□ -0.11
Pif1Q80SX8 Chchd1-203ENSMUST00000224633 557 ntBASIC14.34□□□□□ -0.11
Pif1Q80SX8 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Pif1Q80SX8 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Pif1Q80SX8 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC14.34□□□□□ -0.11
Pif1Q80SX8 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC14.34□□□□□ -0.11
Pif1Q80SX8 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pif1Q80SX8 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pif1Q80SX8 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pif1Q80SX8 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Pif1Q80SX8 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pif1Q80SX8 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Pif1Q80SX8 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Pif1Q80SX8 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pif1Q80SX8 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pif1Q80SX8 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Pif1Q80SX8 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pif1Q80SX8 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
Pif1Q80SX8 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Pif1Q80SX8 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pif1Q80SX8 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Pif1Q80SX8 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pif1Q80SX8 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Pif1Q80SX8 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC14.33□□□□□ -0.12
Pif1Q80SX8 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pif1Q80SX8 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC14.33□□□□□ -0.12
Pif1Q80SX8 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Pif1Q80SX8 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pif1Q80SX8 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC14.33□□□□□ -0.12
Pif1Q80SX8 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Pif1Q80SX8 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC14.33□□□□□ -0.12
Pif1Q80SX8 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Pif1Q80SX8 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pif1Q80SX8 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pif1Q80SX8 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pif1Q80SX8 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC14.33□□□□□ -0.12
Pif1Q80SX8 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pif1Q80SX8 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pif1Q80SX8 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pif1Q80SX8 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Pif1Q80SX8 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pif1Q80SX8 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC14.32□□□□□ -0.12
Pif1Q80SX8 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pif1Q80SX8 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Pif1Q80SX8 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pif1Q80SX8 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Pif1Q80SX8 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pif1Q80SX8 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pif1Q80SX8 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC14.32□□□□□ -0.12
Pif1Q80SX8 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Pif1Q80SX8 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pif1Q80SX8 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Pif1Q80SX8 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Pif1Q80SX8 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC14.32□□□□□ -0.12
Pif1Q80SX8 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pif1Q80SX8 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pif1Q80SX8 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pif1Q80SX8 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Pif1Q80SX8 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
Pif1Q80SX8 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
Pif1Q80SX8 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pif1Q80SX8 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Pif1Q80SX8 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Pif1Q80SX8 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Pif1Q80SX8 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC14.32□□□□□ -0.12
Pif1Q80SX8 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Pif1Q80SX8 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC14.32□□□□□ -0.12
Pif1Q80SX8 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pif1Q80SX8 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Pif1Q80SX8 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pif1Q80SX8 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
Pif1Q80SX8 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pif1Q80SX8 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Pif1Q80SX8 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC14.31□□□□□ -0.12
Pif1Q80SX8 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pif1Q80SX8 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pif1Q80SX8 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pif1Q80SX8 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Pif1Q80SX8 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Pif1Q80SX8 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Pif1Q80SX8 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pif1Q80SX8 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
Pif1Q80SX8 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC14.31□□□□□ -0.12
Pif1Q80SX8 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Pif1Q80SX8 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Pif1Q80SX8 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms