Protein–RNA interactions for Protein: Q6ZPZ3

Zc3h4, Zinc finger CCCH domain-containing protein 4, mousemouse

Known RBP Predictions only

Length 1,304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3h4Q6ZPZ3 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Zc3h4Q6ZPZ3 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Zc3h4Q6ZPZ3 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Zc3h4Q6ZPZ3 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Zc3h4Q6ZPZ3 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Zc3h4Q6ZPZ3 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Zc3h4Q6ZPZ3 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Zc3h4Q6ZPZ3 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Zc3h4Q6ZPZ3 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Zc3h4Q6ZPZ3 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Zc3h4Q6ZPZ3 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Zc3h4Q6ZPZ3 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Zc3h4Q6ZPZ3 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Zc3h4Q6ZPZ3 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Zc3h4Q6ZPZ3 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Zc3h4Q6ZPZ3 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Zc3h4Q6ZPZ3 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Zc3h4Q6ZPZ3 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Zc3h4Q6ZPZ3 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC17.37■□□□□ 0.37
Zc3h4Q6ZPZ3 Gm13823-201ENSMUST00000119930 345 ntBASIC17.37■□□□□ 0.37
Zc3h4Q6ZPZ3 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC17.37■□□□□ 0.37
Zc3h4Q6ZPZ3 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC17.37■□□□□ 0.37
Zc3h4Q6ZPZ3 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Zc3h4Q6ZPZ3 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Zc3h4Q6ZPZ3 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Zc3h4Q6ZPZ3 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Zc3h4Q6ZPZ3 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Zc3h4Q6ZPZ3 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Zc3h4Q6ZPZ3 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Zc3h4Q6ZPZ3 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Zc3h4Q6ZPZ3 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Zc3h4Q6ZPZ3 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Zc3h4Q6ZPZ3 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Zc3h4Q6ZPZ3 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Zc3h4Q6ZPZ3 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC17.37■□□□□ 0.37
Zc3h4Q6ZPZ3 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Zc3h4Q6ZPZ3 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Zc3h4Q6ZPZ3 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Zc3h4Q6ZPZ3 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Zc3h4Q6ZPZ3 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Zc3h4Q6ZPZ3 Gm15635-204ENSMUST00000208024 2539 ntBASIC17.37■□□□□ 0.37
Zc3h4Q6ZPZ3 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Zc3h4Q6ZPZ3 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Zc3h4Q6ZPZ3 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Zc3h4Q6ZPZ3 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Zc3h4Q6ZPZ3 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Zc3h4Q6ZPZ3 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Zc3h4Q6ZPZ3 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Zc3h4Q6ZPZ3 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Zc3h4Q6ZPZ3 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Zc3h4Q6ZPZ3 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Zc3h4Q6ZPZ3 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Zc3h4Q6ZPZ3 Gm7488-201ENSMUST00000117148 684 ntBASIC17.36■□□□□ 0.37
Zc3h4Q6ZPZ3 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Zc3h4Q6ZPZ3 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC17.36■□□□□ 0.37
Zc3h4Q6ZPZ3 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC17.36■□□□□ 0.37
Zc3h4Q6ZPZ3 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Zc3h4Q6ZPZ3 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Zc3h4Q6ZPZ3 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Zc3h4Q6ZPZ3 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Zc3h4Q6ZPZ3 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC17.35■□□□□ 0.37
Zc3h4Q6ZPZ3 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Zc3h4Q6ZPZ3 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Zc3h4Q6ZPZ3 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Zc3h4Q6ZPZ3 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Zc3h4Q6ZPZ3 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Zc3h4Q6ZPZ3 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Zc3h4Q6ZPZ3 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC17.35■□□□□ 0.37
Zc3h4Q6ZPZ3 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Zc3h4Q6ZPZ3 AC154532.1-201ENSMUST00000227860 965 ntBASIC17.35■□□□□ 0.37
Zc3h4Q6ZPZ3 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Zc3h4Q6ZPZ3 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Zc3h4Q6ZPZ3 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Zc3h4Q6ZPZ3 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC17.35■□□□□ 0.37
Zc3h4Q6ZPZ3 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Zc3h4Q6ZPZ3 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Zc3h4Q6ZPZ3 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Zc3h4Q6ZPZ3 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Zc3h4Q6ZPZ3 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Zc3h4Q6ZPZ3 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Zc3h4Q6ZPZ3 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Zc3h4Q6ZPZ3 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Zc3h4Q6ZPZ3 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Zc3h4Q6ZPZ3 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Zc3h4Q6ZPZ3 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC17.35■□□□□ 0.37
Zc3h4Q6ZPZ3 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Zc3h4Q6ZPZ3 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Zc3h4Q6ZPZ3 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Zc3h4Q6ZPZ3 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Zc3h4Q6ZPZ3 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Zc3h4Q6ZPZ3 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Zc3h4Q6ZPZ3 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
Zc3h4Q6ZPZ3 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Zc3h4Q6ZPZ3 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Zc3h4Q6ZPZ3 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Zc3h4Q6ZPZ3 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Zc3h4Q6ZPZ3 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Zc3h4Q6ZPZ3 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Zc3h4Q6ZPZ3 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Zc3h4Q6ZPZ3 Gm14091-201ENSMUST00000133534 874 ntTSL 2 BASIC17.34■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms