Protein–RNA interactions for Protein: Q6P1Y1

Rtl3, Retrotransposon Gag-like protein 3, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtl3Q6P1Y1 Grk6-207ENSMUST00000225925 2769 ntBASIC16.08■□□□□ 0.16
Rtl3Q6P1Y1 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rtl3Q6P1Y1 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
Rtl3Q6P1Y1 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Rtl3Q6P1Y1 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Rtl3Q6P1Y1 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Rtl3Q6P1Y1 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rtl3Q6P1Y1 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Rtl3Q6P1Y1 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Rtl3Q6P1Y1 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Rtl3Q6P1Y1 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rtl3Q6P1Y1 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rtl3Q6P1Y1 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rtl3Q6P1Y1 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC16.07■□□□□ 0.16
Rtl3Q6P1Y1 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC16.07■□□□□ 0.16
Rtl3Q6P1Y1 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC16.07■□□□□ 0.16
Rtl3Q6P1Y1 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC16.07■□□□□ 0.16
Rtl3Q6P1Y1 Gm5364-201ENSMUST00000216789 889 ntBASIC16.07■□□□□ 0.16
Rtl3Q6P1Y1 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC16.07■□□□□ 0.16
Rtl3Q6P1Y1 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Rtl3Q6P1Y1 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Rtl3Q6P1Y1 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Rtl3Q6P1Y1 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rtl3Q6P1Y1 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rtl3Q6P1Y1 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rtl3Q6P1Y1 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rtl3Q6P1Y1 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rtl3Q6P1Y1 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rtl3Q6P1Y1 Gm3928-201ENSMUST00000121141 1307 ntBASIC16.06■□□□□ 0.16
Rtl3Q6P1Y1 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rtl3Q6P1Y1 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC16.06■□□□□ 0.16
Rtl3Q6P1Y1 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC16.06■□□□□ 0.16
Rtl3Q6P1Y1 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC16.06■□□□□ 0.16
Rtl3Q6P1Y1 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Rtl3Q6P1Y1 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC16.06■□□□□ 0.16
Rtl3Q6P1Y1 AC093926.2-201ENSMUST00000214468 1228 ntBASIC16.06■□□□□ 0.16
Rtl3Q6P1Y1 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Rtl3Q6P1Y1 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rtl3Q6P1Y1 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rtl3Q6P1Y1 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Rtl3Q6P1Y1 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rtl3Q6P1Y1 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC16.05■□□□□ 0.16
Rtl3Q6P1Y1 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC16.05■□□□□ 0.16
Rtl3Q6P1Y1 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rtl3Q6P1Y1 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rtl3Q6P1Y1 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rtl3Q6P1Y1 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Rtl3Q6P1Y1 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rtl3Q6P1Y1 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rtl3Q6P1Y1 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rtl3Q6P1Y1 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC16.05■□□□□ 0.16
Rtl3Q6P1Y1 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
Rtl3Q6P1Y1 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rtl3Q6P1Y1 Gm43332-201ENSMUST00000202511 1044 ntBASIC16.05■□□□□ 0.16
Rtl3Q6P1Y1 AC159106.1-201ENSMUST00000224421 690 ntBASIC16.05■□□□□ 0.16
Rtl3Q6P1Y1 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rtl3Q6P1Y1 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rtl3Q6P1Y1 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rtl3Q6P1Y1 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC16.05■□□□□ 0.16
Rtl3Q6P1Y1 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rtl3Q6P1Y1 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rtl3Q6P1Y1 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rtl3Q6P1Y1 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rtl3Q6P1Y1 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rtl3Q6P1Y1 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rtl3Q6P1Y1 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rtl3Q6P1Y1 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rtl3Q6P1Y1 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Rtl3Q6P1Y1 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rtl3Q6P1Y1 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rtl3Q6P1Y1 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rtl3Q6P1Y1 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Rtl3Q6P1Y1 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Rtl3Q6P1Y1 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rtl3Q6P1Y1 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rtl3Q6P1Y1 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rtl3Q6P1Y1 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rtl3Q6P1Y1 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rtl3Q6P1Y1 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Rtl3Q6P1Y1 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rtl3Q6P1Y1 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rtl3Q6P1Y1 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC16.04■□□□□ 0.16
Rtl3Q6P1Y1 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rtl3Q6P1Y1 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Rtl3Q6P1Y1 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Rtl3Q6P1Y1 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Rtl3Q6P1Y1 Gm6550-201ENSMUST00000187574 993 ntBASIC16.04■□□□□ 0.16
Rtl3Q6P1Y1 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rtl3Q6P1Y1 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rtl3Q6P1Y1 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC16.04■□□□□ 0.16
Rtl3Q6P1Y1 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC16.04■□□□□ 0.16
Rtl3Q6P1Y1 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rtl3Q6P1Y1 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Rtl3Q6P1Y1 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rtl3Q6P1Y1 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Rtl3Q6P1Y1 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Rtl3Q6P1Y1 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rtl3Q6P1Y1 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rtl3Q6P1Y1 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rtl3Q6P1Y1 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms