Protein–RNA interactions for Protein: Q66PY1

Scube3, Signal peptide, CUB and EGF-like domain-containing protein 3, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube3Q66PY1 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Scube3Q66PY1 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Scube3Q66PY1 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Scube3Q66PY1 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Scube3Q66PY1 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC16.33■□□□□ 0.2
Scube3Q66PY1 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Scube3Q66PY1 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Scube3Q66PY1 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Scube3Q66PY1 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Scube3Q66PY1 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Scube3Q66PY1 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Scube3Q66PY1 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Scube3Q66PY1 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Scube3Q66PY1 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Scube3Q66PY1 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Scube3Q66PY1 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Scube3Q66PY1 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
Scube3Q66PY1 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Scube3Q66PY1 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Scube3Q66PY1 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Scube3Q66PY1 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Scube3Q66PY1 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scube3Q66PY1 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scube3Q66PY1 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC16.31■□□□□ 0.2
Scube3Q66PY1 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scube3Q66PY1 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC16.31■□□□□ 0.2
Scube3Q66PY1 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scube3Q66PY1 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC16.31■□□□□ 0.2
Scube3Q66PY1 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scube3Q66PY1 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scube3Q66PY1 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Scube3Q66PY1 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scube3Q66PY1 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Scube3Q66PY1 Mir5126-201ENSMUST00000175513 77 ntBASIC16.31■□□□□ 0.2
Scube3Q66PY1 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC16.31■□□□□ 0.2
Scube3Q66PY1 AC158538.2-201ENSMUST00000225455 906 ntBASIC16.31■□□□□ 0.2
Scube3Q66PY1 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scube3Q66PY1 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scube3Q66PY1 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scube3Q66PY1 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scube3Q66PY1 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scube3Q66PY1 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scube3Q66PY1 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scube3Q66PY1 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC16.3■□□□□ 0.2
Scube3Q66PY1 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC16.3■□□□□ 0.2
Scube3Q66PY1 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scube3Q66PY1 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scube3Q66PY1 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Scube3Q66PY1 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scube3Q66PY1 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Scube3Q66PY1 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Scube3Q66PY1 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Scube3Q66PY1 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scube3Q66PY1 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC16.3■□□□□ 0.2
Scube3Q66PY1 AC159093.1-201ENSMUST00000227779 380 ntBASIC16.3■□□□□ 0.2
Scube3Q66PY1 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Scube3Q66PY1 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scube3Q66PY1 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scube3Q66PY1 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scube3Q66PY1 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Scube3Q66PY1 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Scube3Q66PY1 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scube3Q66PY1 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Scube3Q66PY1 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scube3Q66PY1 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scube3Q66PY1 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scube3Q66PY1 Ccdc166-201ENSMUST00000182172 2584 ntBASIC16.3■□□□□ 0.2
Scube3Q66PY1 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC16.29■□□□□ 0.2
Scube3Q66PY1 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC16.29■□□□□ 0.2
Scube3Q66PY1 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Scube3Q66PY1 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Scube3Q66PY1 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Scube3Q66PY1 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Scube3Q66PY1 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Scube3Q66PY1 Gm11185-201ENSMUST00000117732 1007 ntBASIC16.29■□□□□ 0.2
Scube3Q66PY1 Gm13036-201ENSMUST00000117799 748 ntBASIC16.29■□□□□ 0.2
Scube3Q66PY1 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC16.29■□□□□ 0.2
Scube3Q66PY1 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Scube3Q66PY1 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Scube3Q66PY1 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC16.29■□□□□ 0.2
Scube3Q66PY1 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC16.29■□□□□ 0.2
Scube3Q66PY1 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC16.29■□□□□ 0.2
Scube3Q66PY1 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC16.29■□□□□ 0.2
Scube3Q66PY1 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Scube3Q66PY1 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Scube3Q66PY1 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Scube3Q66PY1 AC154527.4-201ENSMUST00000224364 1667 ntBASIC16.29■□□□□ 0.2
Scube3Q66PY1 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
Scube3Q66PY1 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Scube3Q66PY1 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Scube3Q66PY1 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Scube3Q66PY1 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Scube3Q66PY1 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Scube3Q66PY1 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Scube3Q66PY1 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Scube3Q66PY1 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Scube3Q66PY1 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Scube3Q66PY1 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Scube3Q66PY1 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Scube3Q66PY1 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC16.28■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms