Protein–RNA interactions for Protein: Q64739

Col11a2, Collagen alpha-2(XI) chain, mousemouse

Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a2Q64739 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC18.62■□□□□ 0.57
Col11a2Q64739 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Col11a2Q64739 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Col11a2Q64739 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Col11a2Q64739 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC18.61■□□□□ 0.57
Col11a2Q64739 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Col11a2Q64739 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Col11a2Q64739 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Col11a2Q64739 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC18.61■□□□□ 0.57
Col11a2Q64739 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC18.61■□□□□ 0.57
Col11a2Q64739 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC18.61■□□□□ 0.57
Col11a2Q64739 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Col11a2Q64739 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Col11a2Q64739 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
Col11a2Q64739 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Col11a2Q64739 AC125350.2-201ENSMUST00000224737 727 ntBASIC18.61■□□□□ 0.57
Col11a2Q64739 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC18.61■□□□□ 0.57
Col11a2Q64739 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Col11a2Q64739 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Col11a2Q64739 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Col11a2Q64739 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Col11a2Q64739 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Col11a2Q64739 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Col11a2Q64739 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Col11a2Q64739 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Col11a2Q64739 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Col11a2Q64739 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC18.6■□□□□ 0.57
Col11a2Q64739 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC18.6■□□□□ 0.57
Col11a2Q64739 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC18.6■□□□□ 0.57
Col11a2Q64739 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC18.6■□□□□ 0.57
Col11a2Q64739 AC164567.1-201ENSMUST00000219185 960 ntBASIC18.6■□□□□ 0.57
Col11a2Q64739 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Col11a2Q64739 Gm5898-201ENSMUST00000121016 2071 ntBASIC18.6■□□□□ 0.57
Col11a2Q64739 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Col11a2Q64739 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Col11a2Q64739 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Col11a2Q64739 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Col11a2Q64739 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Col11a2Q64739 Gm4204-201ENSMUST00000110798 1231 ntBASIC18.6■□□□□ 0.57
Col11a2Q64739 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC18.6■□□□□ 0.57
Col11a2Q64739 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
Col11a2Q64739 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Col11a2Q64739 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC18.6■□□□□ 0.57
Col11a2Q64739 Gm42612-201ENSMUST00000197986 623 ntBASIC18.6■□□□□ 0.57
Col11a2Q64739 Gm43170-201ENSMUST00000199827 612 ntBASIC18.6■□□□□ 0.57
Col11a2Q64739 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Col11a2Q64739 Gm45384-201ENSMUST00000210451 277 ntBASIC18.6■□□□□ 0.57
Col11a2Q64739 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Col11a2Q64739 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Col11a2Q64739 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Col11a2Q64739 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Col11a2Q64739 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Col11a2Q64739 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Col11a2Q64739 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Col11a2Q64739 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC18.59■□□□□ 0.57
Col11a2Q64739 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Col11a2Q64739 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Col11a2Q64739 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Col11a2Q64739 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC18.59■□□□□ 0.57
Col11a2Q64739 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Col11a2Q64739 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Col11a2Q64739 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Col11a2Q64739 Shd-206ENSMUST00000225145 998 ntBASIC18.59■□□□□ 0.57
Col11a2Q64739 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Col11a2Q64739 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Col11a2Q64739 Ldb3-207ENSMUST00000227819 1499 ntBASIC18.59■□□□□ 0.57
Col11a2Q64739 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Col11a2Q64739 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC18.58■□□□□ 0.57
Col11a2Q64739 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Col11a2Q64739 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Col11a2Q64739 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Col11a2Q64739 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Col11a2Q64739 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Col11a2Q64739 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC18.58■□□□□ 0.56
Col11a2Q64739 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Col11a2Q64739 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Col11a2Q64739 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Col11a2Q64739 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Col11a2Q64739 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC18.58■□□□□ 0.56
Col11a2Q64739 Gm15163-201ENSMUST00000120749 1302 ntBASIC18.58■□□□□ 0.56
Col11a2Q64739 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Col11a2Q64739 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Col11a2Q64739 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Col11a2Q64739 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Col11a2Q64739 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Col11a2Q64739 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC18.57■□□□□ 0.56
Col11a2Q64739 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Col11a2Q64739 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Col11a2Q64739 Mir7085-201ENSMUST00000184353 66 ntBASIC18.57■□□□□ 0.56
Col11a2Q64739 Gm29310-201ENSMUST00000185468 696 ntBASIC18.57■□□□□ 0.56
Col11a2Q64739 Gm21825-201ENSMUST00000185728 696 ntBASIC18.57■□□□□ 0.56
Col11a2Q64739 Gm29109-201ENSMUST00000185895 696 ntBASIC18.57■□□□□ 0.56
Col11a2Q64739 Gm21896-201ENSMUST00000186520 696 ntBASIC18.57■□□□□ 0.56
Col11a2Q64739 Gm21873-201ENSMUST00000186728 696 ntBASIC18.57■□□□□ 0.56
Col11a2Q64739 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC18.57■□□□□ 0.56
Col11a2Q64739 Gm21794-201ENSMUST00000187056 696 ntBASIC18.57■□□□□ 0.56
Col11a2Q64739 Gm21880-201ENSMUST00000187275 696 ntBASIC18.57■□□□□ 0.56
Col11a2Q64739 Gm21826-201ENSMUST00000187451 696 ntBASIC18.57■□□□□ 0.56
Col11a2Q64739 Gm21198-201ENSMUST00000188393 696 ntBASIC18.57■□□□□ 0.56
Col11a2Q64739 Gm21749-201ENSMUST00000189343 696 ntBASIC18.57■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms