Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
VcanQ62059 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
VcanQ62059 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
VcanQ62059 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
VcanQ62059 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
VcanQ62059 Gm6263-201ENSMUST00000120029 1342 ntBASIC14.49□□□□□ -0.09
VcanQ62059 Gm15635-204ENSMUST00000208024 2539 ntBASIC14.49□□□□□ -0.09
VcanQ62059 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
VcanQ62059 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
VcanQ62059 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
VcanQ62059 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
VcanQ62059 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
VcanQ62059 Asic1-205ENSMUST00000228185 1818 ntBASIC14.48□□□□□ -0.09
VcanQ62059 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC14.48□□□□□ -0.09
VcanQ62059 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
VcanQ62059 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
VcanQ62059 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
VcanQ62059 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
VcanQ62059 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
VcanQ62059 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
VcanQ62059 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
VcanQ62059 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC14.48□□□□□ -0.09
VcanQ62059 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC14.48□□□□□ -0.09
VcanQ62059 Gm9824-201ENSMUST00000178707 561 ntBASIC14.48□□□□□ -0.09
VcanQ62059 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC14.48□□□□□ -0.09
VcanQ62059 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
VcanQ62059 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC14.48□□□□□ -0.09
VcanQ62059 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
VcanQ62059 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
VcanQ62059 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
VcanQ62059 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC14.48□□□□□ -0.09
VcanQ62059 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
VcanQ62059 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
VcanQ62059 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
VcanQ62059 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
VcanQ62059 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
VcanQ62059 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
VcanQ62059 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
VcanQ62059 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
VcanQ62059 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
VcanQ62059 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
VcanQ62059 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
VcanQ62059 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
VcanQ62059 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
VcanQ62059 Gm6973-201ENSMUST00000117080 721 ntBASIC14.47□□□□□ -0.09
VcanQ62059 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC14.47□□□□□ -0.09
VcanQ62059 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
VcanQ62059 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
VcanQ62059 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
VcanQ62059 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
VcanQ62059 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
VcanQ62059 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
VcanQ62059 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
VcanQ62059 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
VcanQ62059 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC14.47□□□□□ -0.09
VcanQ62059 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
VcanQ62059 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
VcanQ62059 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
VcanQ62059 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
VcanQ62059 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
VcanQ62059 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
VcanQ62059 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
VcanQ62059 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
VcanQ62059 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
VcanQ62059 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC14.46□□□□□ -0.09
VcanQ62059 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
VcanQ62059 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
VcanQ62059 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
VcanQ62059 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC14.46□□□□□ -0.09
VcanQ62059 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
VcanQ62059 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
VcanQ62059 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
VcanQ62059 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC14.46□□□□□ -0.09
VcanQ62059 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
VcanQ62059 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
VcanQ62059 Gm12957-201ENSMUST00000117835 377 ntBASIC14.46□□□□□ -0.1
VcanQ62059 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC14.46□□□□□ -0.1
VcanQ62059 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
VcanQ62059 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC14.46□□□□□ -0.1
VcanQ62059 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
VcanQ62059 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC14.46□□□□□ -0.1
VcanQ62059 Gm10154-201ENSMUST00000084445 354 ntBASIC14.46□□□□□ -0.1
VcanQ62059 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
VcanQ62059 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
VcanQ62059 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC14.46□□□□□ -0.1
VcanQ62059 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
VcanQ62059 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
VcanQ62059 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
VcanQ62059 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
VcanQ62059 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
VcanQ62059 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
VcanQ62059 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC14.45□□□□□ -0.1
VcanQ62059 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC14.45□□□□□ -0.1
VcanQ62059 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC14.45□□□□□ -0.1
VcanQ62059 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC14.45□□□□□ -0.1
VcanQ62059 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
VcanQ62059 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
VcanQ62059 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
VcanQ62059 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
VcanQ62059 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms