Protein–RNA interactions for Protein: Q61216

Mre11, Double-strand break repair protein MRE11, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mre11Q61216 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Mre11Q61216 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
Mre11Q61216 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Mre11Q61216 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Mre11Q61216 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Mre11Q61216 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Mre11Q61216 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Mre11Q61216 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC18.68■□□□□ 0.58
Mre11Q61216 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
Mre11Q61216 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Mre11Q61216 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Mre11Q61216 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Mre11Q61216 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Mre11Q61216 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Mre11Q61216 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Mre11Q61216 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Mre11Q61216 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Mre11Q61216 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Mre11Q61216 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC18.68■□□□□ 0.58
Mre11Q61216 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC18.68■□□□□ 0.58
Mre11Q61216 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Mre11Q61216 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Mre11Q61216 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Mre11Q61216 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC18.68■□□□□ 0.58
Mre11Q61216 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Mre11Q61216 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Mre11Q61216 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Mre11Q61216 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Mre11Q61216 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC18.68■□□□□ 0.58
Mre11Q61216 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC18.68■□□□□ 0.58
Mre11Q61216 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Mre11Q61216 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Mre11Q61216 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Mre11Q61216 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Mre11Q61216 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Mre11Q61216 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Mre11Q61216 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Mre11Q61216 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Mre11Q61216 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Mre11Q61216 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
Mre11Q61216 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Mre11Q61216 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC18.67■□□□□ 0.58
Mre11Q61216 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Mre11Q61216 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Mre11Q61216 Gm18666-201ENSMUST00000190039 958 ntBASIC18.67■□□□□ 0.58
Mre11Q61216 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Mre11Q61216 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Mre11Q61216 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Mre11Q61216 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Mre11Q61216 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Mre11Q61216 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Mre11Q61216 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Mre11Q61216 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Mre11Q61216 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Mre11Q61216 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC18.67■□□□□ 0.58
Mre11Q61216 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Mre11Q61216 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
Mre11Q61216 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Mre11Q61216 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Mre11Q61216 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Mre11Q61216 Nupl1-207ENSMUST00000225311 2475 ntBASIC18.66■□□□□ 0.58
Mre11Q61216 Gm43205-201ENSMUST00000198622 1968 ntBASIC18.66■□□□□ 0.58
Mre11Q61216 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Mre11Q61216 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Mre11Q61216 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Mre11Q61216 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Mre11Q61216 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Mre11Q61216 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Mre11Q61216 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Mre11Q61216 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC18.66■□□□□ 0.58
Mre11Q61216 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Mre11Q61216 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Mre11Q61216 Gm27275-201ENSMUST00000184318 272 ntBASIC18.66■□□□□ 0.58
Mre11Q61216 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Mre11Q61216 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
Mre11Q61216 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Mre11Q61216 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Mre11Q61216 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Mre11Q61216 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Mre11Q61216 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
Mre11Q61216 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Mre11Q61216 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
Mre11Q61216 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Mre11Q61216 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Mre11Q61216 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Mre11Q61216 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Mre11Q61216 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Mre11Q61216 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Mre11Q61216 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Mre11Q61216 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Mre11Q61216 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC18.65■□□□□ 0.58
Mre11Q61216 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC18.65■□□□□ 0.58
Mre11Q61216 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Mre11Q61216 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Mre11Q61216 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Mre11Q61216 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Mre11Q61216 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Mre11Q61216 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC18.65■□□□□ 0.58
Mre11Q61216 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC18.65■□□□□ 0.58
Mre11Q61216 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms