Protein–RNA interactions for Protein: Q61009

Scarb1, Scavenger receptor class B member 1, mousemouse

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scarb1Q61009 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Scarb1Q61009 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Scarb1Q61009 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Scarb1Q61009 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Scarb1Q61009 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Scarb1Q61009 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Scarb1Q61009 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Scarb1Q61009 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Scarb1Q61009 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Scarb1Q61009 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Scarb1Q61009 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Scarb1Q61009 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Scarb1Q61009 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Scarb1Q61009 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Scarb1Q61009 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Scarb1Q61009 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
Scarb1Q61009 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Scarb1Q61009 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Scarb1Q61009 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Scarb1Q61009 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Scarb1Q61009 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC13.16□□□□□ -0.3
Scarb1Q61009 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Scarb1Q61009 Gm11336-201ENSMUST00000118168 334 ntBASIC13.16□□□□□ -0.3
Scarb1Q61009 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
Scarb1Q61009 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Scarb1Q61009 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC13.16□□□□□ -0.3
Scarb1Q61009 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Scarb1Q61009 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Scarb1Q61009 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Scarb1Q61009 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Scarb1Q61009 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Scarb1Q61009 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC13.16□□□□□ -0.3
Scarb1Q61009 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Scarb1Q61009 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Scarb1Q61009 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Scarb1Q61009 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Scarb1Q61009 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Scarb1Q61009 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Scarb1Q61009 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Scarb1Q61009 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC13.15□□□□□ -0.3
Scarb1Q61009 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Scarb1Q61009 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Scarb1Q61009 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Scarb1Q61009 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Scarb1Q61009 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Scarb1Q61009 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Scarb1Q61009 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC13.15□□□□□ -0.3
Scarb1Q61009 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Scarb1Q61009 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Scarb1Q61009 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Scarb1Q61009 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC13.15□□□□□ -0.3
Scarb1Q61009 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC13.15□□□□□ -0.3
Scarb1Q61009 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Scarb1Q61009 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Scarb1Q61009 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Scarb1Q61009 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC13.15□□□□□ -0.3
Scarb1Q61009 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Scarb1Q61009 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Scarb1Q61009 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC13.15□□□□□ -0.3
Scarb1Q61009 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Scarb1Q61009 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Scarb1Q61009 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.31
Scarb1Q61009 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.31
Scarb1Q61009 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Scarb1Q61009 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Scarb1Q61009 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Scarb1Q61009 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Scarb1Q61009 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC13.14□□□□□ -0.31
Scarb1Q61009 Sorbs3-204ENSMUST00000227929 2460 ntBASIC13.14□□□□□ -0.31
Scarb1Q61009 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Scarb1Q61009 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Scarb1Q61009 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Scarb1Q61009 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC13.14□□□□□ -0.31
Scarb1Q61009 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Scarb1Q61009 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC13.14□□□□□ -0.31
Scarb1Q61009 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Scarb1Q61009 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Scarb1Q61009 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Scarb1Q61009 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
Scarb1Q61009 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Scarb1Q61009 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Scarb1Q61009 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Scarb1Q61009 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Scarb1Q61009 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Scarb1Q61009 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Scarb1Q61009 Spsb2-203ENSMUST00000112473 1322 ntBASIC13.13□□□□□ -0.31
Scarb1Q61009 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Scarb1Q61009 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Scarb1Q61009 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Scarb1Q61009 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Scarb1Q61009 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Scarb1Q61009 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Scarb1Q61009 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
Scarb1Q61009 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Scarb1Q61009 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC13.13□□□□□ -0.31
Scarb1Q61009 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC13.13□□□□□ -0.31
Scarb1Q61009 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Scarb1Q61009 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Scarb1Q61009 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Scarb1Q61009 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 55.5 ms