Protein–RNA interactions for Protein: Q5R1I4

Trav6-2, T cell receptor alpha variable 6-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-2Q5R1I4 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav6-2Q5R1I4 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav6-2Q5R1I4 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
Trav6-2Q5R1I4 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav6-2Q5R1I4 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav6-2Q5R1I4 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trav6-2Q5R1I4 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav6-2Q5R1I4 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trav6-2Q5R1I4 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav6-2Q5R1I4 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trav6-2Q5R1I4 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav6-2Q5R1I4 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trav6-2Q5R1I4 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Trav6-2Q5R1I4 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav6-2Q5R1I4 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav6-2Q5R1I4 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav6-2Q5R1I4 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav6-2Q5R1I4 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC13.63□□□□□ -0.23
Trav6-2Q5R1I4 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC13.63□□□□□ -0.23
Trav6-2Q5R1I4 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav6-2Q5R1I4 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trav6-2Q5R1I4 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC13.63□□□□□ -0.23
Trav6-2Q5R1I4 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav6-2Q5R1I4 Gm5177-201ENSMUST00000183092 997 ntBASIC13.63□□□□□ -0.23
Trav6-2Q5R1I4 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC13.63□□□□□ -0.23
Trav6-2Q5R1I4 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trav6-2Q5R1I4 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav6-2Q5R1I4 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav6-2Q5R1I4 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav6-2Q5R1I4 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Trav6-2Q5R1I4 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC13.63□□□□□ -0.23
Trav6-2Q5R1I4 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav6-2Q5R1I4 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav6-2Q5R1I4 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav6-2Q5R1I4 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav6-2Q5R1I4 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Trav6-2Q5R1I4 AC121598.2-201ENSMUST00000228376 2325 ntBASIC13.63□□□□□ -0.23
Trav6-2Q5R1I4 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav6-2Q5R1I4 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Trav6-2Q5R1I4 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav6-2Q5R1I4 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Trav6-2Q5R1I4 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav6-2Q5R1I4 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav6-2Q5R1I4 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Trav6-2Q5R1I4 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav6-2Q5R1I4 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav6-2Q5R1I4 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC13.62□□□□□ -0.23
Trav6-2Q5R1I4 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
Trav6-2Q5R1I4 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav6-2Q5R1I4 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trav6-2Q5R1I4 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav6-2Q5R1I4 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav6-2Q5R1I4 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav6-2Q5R1I4 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
Trav6-2Q5R1I4 Gm15427-201ENSMUST00000117288 531 ntBASIC13.62□□□□□ -0.23
Trav6-2Q5R1I4 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC13.62□□□□□ -0.23
Trav6-2Q5R1I4 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC13.62□□□□□ -0.23
Trav6-2Q5R1I4 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC13.62□□□□□ -0.23
Trav6-2Q5R1I4 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC13.62□□□□□ -0.23
Trav6-2Q5R1I4 Gm8396-201ENSMUST00000057361 823 ntBASIC13.62□□□□□ -0.23
Trav6-2Q5R1I4 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav6-2Q5R1I4 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav6-2Q5R1I4 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav6-2Q5R1I4 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trav6-2Q5R1I4 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav6-2Q5R1I4 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav6-2Q5R1I4 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav6-2Q5R1I4 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav6-2Q5R1I4 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trav6-2Q5R1I4 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC13.61□□□□□ -0.23
Trav6-2Q5R1I4 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC13.61□□□□□ -0.23
Trav6-2Q5R1I4 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav6-2Q5R1I4 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Trav6-2Q5R1I4 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav6-2Q5R1I4 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav6-2Q5R1I4 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav6-2Q5R1I4 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav6-2Q5R1I4 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC13.61□□□□□ -0.23
Trav6-2Q5R1I4 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav6-2Q5R1I4 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Trav6-2Q5R1I4 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC13.61□□□□□ -0.23
Trav6-2Q5R1I4 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Trav6-2Q5R1I4 Gm45747-201ENSMUST00000212203 999 ntBASIC13.61□□□□□ -0.23
Trav6-2Q5R1I4 Thap2-203ENSMUST00000218989 527 ntBASIC13.61□□□□□ -0.23
Trav6-2Q5R1I4 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC13.61□□□□□ -0.23
Trav6-2Q5R1I4 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav6-2Q5R1I4 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav6-2Q5R1I4 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav6-2Q5R1I4 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav6-2Q5R1I4 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav6-2Q5R1I4 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trav6-2Q5R1I4 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trav6-2Q5R1I4 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav6-2Q5R1I4 AC119177.1-201ENSMUST00000227647 1332 ntBASIC13.61□□□□□ -0.23
Trav6-2Q5R1I4 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Trav6-2Q5R1I4 AC157650.3-201ENSMUST00000225058 1476 ntBASIC13.61□□□□□ -0.23
Trav6-2Q5R1I4 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Trav6-2Q5R1I4 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav6-2Q5R1I4 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav6-2Q5R1I4 Nrn1-204ENSMUST00000224323 1779 ntBASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms