Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rc3h1Q4VGL6 Gm14822-201ENSMUST00000122247 291 ntBASIC17.95■□□□□ 0.46
Rc3h1Q4VGL6 Mir8117-201ENSMUST00000184773 107 ntBASIC17.95■□□□□ 0.46
Rc3h1Q4VGL6 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rc3h1Q4VGL6 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
Rc3h1Q4VGL6 App-207ENSMUST00000227737 2827 ntBASIC17.95■□□□□ 0.46
Rc3h1Q4VGL6 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rc3h1Q4VGL6 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rc3h1Q4VGL6 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Rc3h1Q4VGL6 Gm5421-201ENSMUST00000181698 2354 ntBASIC17.95■□□□□ 0.46
Rc3h1Q4VGL6 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Rc3h1Q4VGL6 Gm5366-201ENSMUST00000215494 1338 ntBASIC17.95■□□□□ 0.46
Rc3h1Q4VGL6 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rc3h1Q4VGL6 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rc3h1Q4VGL6 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rc3h1Q4VGL6 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rc3h1Q4VGL6 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rc3h1Q4VGL6 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rc3h1Q4VGL6 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rc3h1Q4VGL6 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Rc3h1Q4VGL6 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC17.94■□□□□ 0.46
Rc3h1Q4VGL6 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Rc3h1Q4VGL6 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rc3h1Q4VGL6 Gm8318-201ENSMUST00000182954 872 ntBASIC17.94■□□□□ 0.46
Rc3h1Q4VGL6 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC17.94■□□□□ 0.46
Rc3h1Q4VGL6 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC17.94■□□□□ 0.46
Rc3h1Q4VGL6 AC069562.2-201ENSMUST00000224644 2146 ntBASIC17.94■□□□□ 0.46
Rc3h1Q4VGL6 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Rc3h1Q4VGL6 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rc3h1Q4VGL6 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rc3h1Q4VGL6 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Rc3h1Q4VGL6 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Rc3h1Q4VGL6 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Rc3h1Q4VGL6 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rc3h1Q4VGL6 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rc3h1Q4VGL6 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC17.93■□□□□ 0.46
Rc3h1Q4VGL6 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rc3h1Q4VGL6 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC17.93■□□□□ 0.46
Rc3h1Q4VGL6 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rc3h1Q4VGL6 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Rc3h1Q4VGL6 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Rc3h1Q4VGL6 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Rc3h1Q4VGL6 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rc3h1Q4VGL6 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rc3h1Q4VGL6 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rc3h1Q4VGL6 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Rc3h1Q4VGL6 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Rc3h1Q4VGL6 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC17.93■□□□□ 0.46
Rc3h1Q4VGL6 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rc3h1Q4VGL6 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rc3h1Q4VGL6 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rc3h1Q4VGL6 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC17.93■□□□□ 0.46
Rc3h1Q4VGL6 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rc3h1Q4VGL6 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rc3h1Q4VGL6 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rc3h1Q4VGL6 AC119177.1-201ENSMUST00000227647 1332 ntBASIC17.93■□□□□ 0.46
Rc3h1Q4VGL6 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rc3h1Q4VGL6 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC17.92■□□□□ 0.46
Rc3h1Q4VGL6 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rc3h1Q4VGL6 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rc3h1Q4VGL6 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rc3h1Q4VGL6 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rc3h1Q4VGL6 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC17.92■□□□□ 0.46
Rc3h1Q4VGL6 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rc3h1Q4VGL6 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Rc3h1Q4VGL6 Gm23935-201ENSMUST00000102303 57 ntBASIC17.92■□□□□ 0.46
Rc3h1Q4VGL6 Gm24270-201ENSMUST00000102326 57 ntBASIC17.92■□□□□ 0.46
Rc3h1Q4VGL6 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC17.92■□□□□ 0.46
Rc3h1Q4VGL6 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rc3h1Q4VGL6 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC17.92■□□□□ 0.46
Rc3h1Q4VGL6 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Rc3h1Q4VGL6 Gm24245-201ENSMUST00000157318 57 ntBASIC17.92■□□□□ 0.46
Rc3h1Q4VGL6 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Rc3h1Q4VGL6 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC17.92■□□□□ 0.46
Rc3h1Q4VGL6 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rc3h1Q4VGL6 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rc3h1Q4VGL6 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rc3h1Q4VGL6 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rc3h1Q4VGL6 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC17.92■□□□□ 0.46
Rc3h1Q4VGL6 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Rc3h1Q4VGL6 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC17.92■□□□□ 0.46
Rc3h1Q4VGL6 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rc3h1Q4VGL6 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rc3h1Q4VGL6 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rc3h1Q4VGL6 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC17.91■□□□□ 0.46
Rc3h1Q4VGL6 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rc3h1Q4VGL6 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rc3h1Q4VGL6 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC17.91■□□□□ 0.46
Rc3h1Q4VGL6 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Rc3h1Q4VGL6 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Rc3h1Q4VGL6 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC17.91■□□□□ 0.46
Rc3h1Q4VGL6 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC17.91■□□□□ 0.46
Rc3h1Q4VGL6 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
Rc3h1Q4VGL6 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rc3h1Q4VGL6 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Rc3h1Q4VGL6 Gm24513-201ENSMUST00000174964 138 ntBASIC17.91■□□□□ 0.46
Rc3h1Q4VGL6 Gm27397-201ENSMUST00000184997 107 ntBASIC17.91■□□□□ 0.46
Rc3h1Q4VGL6 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Rc3h1Q4VGL6 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Rc3h1Q4VGL6 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms