Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cks1brtQ3UNC9 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cks1brtQ3UNC9 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cks1brtQ3UNC9 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cks1brtQ3UNC9 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cks1brtQ3UNC9 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Cks1brtQ3UNC9 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cks1brtQ3UNC9 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Cks1brtQ3UNC9 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cks1brtQ3UNC9 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cks1brtQ3UNC9 BC037039-201ENSMUST00000192003 2205 ntBASIC11.26□□□□□ -0.61
Cks1brtQ3UNC9 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cks1brtQ3UNC9 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC11.26□□□□□ -0.61
Cks1brtQ3UNC9 Gm5408-201ENSMUST00000197998 747 ntBASIC11.26□□□□□ -0.61
Cks1brtQ3UNC9 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cks1brtQ3UNC9 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cks1brtQ3UNC9 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cks1brtQ3UNC9 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cks1brtQ3UNC9 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cks1brtQ3UNC9 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cks1brtQ3UNC9 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Cks1brtQ3UNC9 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Cks1brtQ3UNC9 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cks1brtQ3UNC9 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cks1brtQ3UNC9 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cks1brtQ3UNC9 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Cks1brtQ3UNC9 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cks1brtQ3UNC9 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cks1brtQ3UNC9 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC11.25□□□□□ -0.61
Cks1brtQ3UNC9 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Cks1brtQ3UNC9 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Cks1brtQ3UNC9 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cks1brtQ3UNC9 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
Cks1brtQ3UNC9 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Cks1brtQ3UNC9 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cks1brtQ3UNC9 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cks1brtQ3UNC9 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Cks1brtQ3UNC9 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC11.25□□□□□ -0.61
Cks1brtQ3UNC9 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cks1brtQ3UNC9 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Cks1brtQ3UNC9 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cks1brtQ3UNC9 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cks1brtQ3UNC9 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Cks1brtQ3UNC9 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cks1brtQ3UNC9 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC11.25□□□□□ -0.61
Cks1brtQ3UNC9 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Cks1brtQ3UNC9 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Cks1brtQ3UNC9 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
Cks1brtQ3UNC9 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cks1brtQ3UNC9 Ap3s1-204ENSMUST00000225520 957 ntBASIC11.25□□□□□ -0.61
Cks1brtQ3UNC9 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cks1brtQ3UNC9 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Cks1brtQ3UNC9 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cks1brtQ3UNC9 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cks1brtQ3UNC9 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cks1brtQ3UNC9 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cks1brtQ3UNC9 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Cks1brtQ3UNC9 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cks1brtQ3UNC9 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cks1brtQ3UNC9 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Cks1brtQ3UNC9 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Cks1brtQ3UNC9 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Cks1brtQ3UNC9 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Cks1brtQ3UNC9 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cks1brtQ3UNC9 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cks1brtQ3UNC9 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Cks1brtQ3UNC9 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC11.25□□□□□ -0.61
Cks1brtQ3UNC9 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cks1brtQ3UNC9 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Cks1brtQ3UNC9 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Cks1brtQ3UNC9 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Cks1brtQ3UNC9 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cks1brtQ3UNC9 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Cks1brtQ3UNC9 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cks1brtQ3UNC9 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cks1brtQ3UNC9 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cks1brtQ3UNC9 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cks1brtQ3UNC9 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cks1brtQ3UNC9 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Cks1brtQ3UNC9 Gm37728-201ENSMUST00000195025 2292 ntBASIC11.24□□□□□ -0.61
Cks1brtQ3UNC9 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cks1brtQ3UNC9 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Cks1brtQ3UNC9 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cks1brtQ3UNC9 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cks1brtQ3UNC9 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cks1brtQ3UNC9 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Cks1brtQ3UNC9 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Cks1brtQ3UNC9 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cks1brtQ3UNC9 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Cks1brtQ3UNC9 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Cks1brtQ3UNC9 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC11.24□□□□□ -0.61
Cks1brtQ3UNC9 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Cks1brtQ3UNC9 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cks1brtQ3UNC9 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cks1brtQ3UNC9 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC11.24□□□□□ -0.61
Cks1brtQ3UNC9 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cks1brtQ3UNC9 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cks1brtQ3UNC9 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cks1brtQ3UNC9 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Cks1brtQ3UNC9 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms