Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Spg11Q3UHA3 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Spg11Q3UHA3 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC14.24□□□□□ -0.13
Spg11Q3UHA3 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC14.24□□□□□ -0.13
Spg11Q3UHA3 Gm15483-201ENSMUST00000120338 456 ntBASIC14.24□□□□□ -0.13
Spg11Q3UHA3 Gm9719-201ENSMUST00000162765 543 ntBASIC14.24□□□□□ -0.13
Spg11Q3UHA3 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Spg11Q3UHA3 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Spg11Q3UHA3 Gm27920-201ENSMUST00000183953 96 ntBASIC14.24□□□□□ -0.13
Spg11Q3UHA3 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Spg11Q3UHA3 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC14.24□□□□□ -0.13
Spg11Q3UHA3 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Spg11Q3UHA3 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Spg11Q3UHA3 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Spg11Q3UHA3 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Spg11Q3UHA3 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Spg11Q3UHA3 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC14.23□□□□□ -0.13
Spg11Q3UHA3 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Spg11Q3UHA3 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Spg11Q3UHA3 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Spg11Q3UHA3 Gm45784-201ENSMUST00000188360 142 ntBASIC14.23□□□□□ -0.13
Spg11Q3UHA3 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Spg11Q3UHA3 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Spg11Q3UHA3 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Spg11Q3UHA3 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Spg11Q3UHA3 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Spg11Q3UHA3 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Spg11Q3UHA3 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Spg11Q3UHA3 Gm12390-201ENSMUST00000117897 397 ntBASIC14.23□□□□□ -0.13
Spg11Q3UHA3 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC14.23□□□□□ -0.13
Spg11Q3UHA3 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC14.23□□□□□ -0.13
Spg11Q3UHA3 AC162801.1-201ENSMUST00000220612 198 ntBASIC14.23□□□□□ -0.13
Spg11Q3UHA3 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Spg11Q3UHA3 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Spg11Q3UHA3 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC14.23□□□□□ -0.13
Spg11Q3UHA3 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Spg11Q3UHA3 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Spg11Q3UHA3 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
Spg11Q3UHA3 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Spg11Q3UHA3 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Spg11Q3UHA3 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Spg11Q3UHA3 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Spg11Q3UHA3 Gm21854-201ENSMUST00000179901 471 ntBASIC14.22□□□□□ -0.13
Spg11Q3UHA3 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC14.22□□□□□ -0.13
Spg11Q3UHA3 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Spg11Q3UHA3 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Spg11Q3UHA3 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Spg11Q3UHA3 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Spg11Q3UHA3 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Spg11Q3UHA3 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Spg11Q3UHA3 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC14.22□□□□□ -0.13
Spg11Q3UHA3 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Spg11Q3UHA3 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Spg11Q3UHA3 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Spg11Q3UHA3 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Spg11Q3UHA3 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC14.22□□□□□ -0.13
Spg11Q3UHA3 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Spg11Q3UHA3 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC14.22□□□□□ -0.13
Spg11Q3UHA3 Gm44974-201ENSMUST00000206387 1279 ntBASIC14.22□□□□□ -0.13
Spg11Q3UHA3 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Spg11Q3UHA3 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Spg11Q3UHA3 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Spg11Q3UHA3 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Spg11Q3UHA3 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Spg11Q3UHA3 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Spg11Q3UHA3 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC14.21□□□□□ -0.13
Spg11Q3UHA3 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Spg11Q3UHA3 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Spg11Q3UHA3 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Spg11Q3UHA3 Gm7669-201ENSMUST00000210184 1603 ntBASIC14.21□□□□□ -0.13
Spg11Q3UHA3 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Spg11Q3UHA3 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Spg11Q3UHA3 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Spg11Q3UHA3 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Spg11Q3UHA3 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Spg11Q3UHA3 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Spg11Q3UHA3 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC14.21□□□□□ -0.14
Spg11Q3UHA3 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Spg11Q3UHA3 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Spg11Q3UHA3 Gm28760-201ENSMUST00000185995 736 ntBASIC14.21□□□□□ -0.14
Spg11Q3UHA3 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC14.21□□□□□ -0.14
Spg11Q3UHA3 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC14.21□□□□□ -0.14
Spg11Q3UHA3 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Spg11Q3UHA3 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Spg11Q3UHA3 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Spg11Q3UHA3 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Spg11Q3UHA3 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Spg11Q3UHA3 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC14.2□□□□□ -0.14
Spg11Q3UHA3 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
Spg11Q3UHA3 Gm8835-201ENSMUST00000173096 1169 ntBASIC14.2□□□□□ -0.14
Spg11Q3UHA3 Gm3436-201ENSMUST00000179930 840 ntBASIC14.2□□□□□ -0.14
Spg11Q3UHA3 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
Spg11Q3UHA3 Dupd1-202ENSMUST00000224735 548 ntBASIC14.2□□□□□ -0.14
Spg11Q3UHA3 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Spg11Q3UHA3 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Spg11Q3UHA3 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Spg11Q3UHA3 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Spg11Q3UHA3 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Spg11Q3UHA3 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Spg11Q3UHA3 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms